Job Description P36879 Confidence 100.00% Date Thu Jan 5 11:53:55 GMT 2012 Rank 51 Aligned Residues 211 % Identity 23% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		M	T	I	A	L	E	L	Q	Q	L	K	K	T	Y	P	G	G	V	Q	A	L	R	G	I	D	L	Q	V	E	A	G	D	F	Y	A	L	L	G	P	N	G	A	G	K	S	T	T	I	G	I	I	S	S	L	V	N	K	T	S	G	R	V	S	V	F	G	Y	D	L	E	K	.	D	V	V	N	A	K	R	Q
Query Conservation																																																																									.
Alig confidence																	.	.	.																																									.													.
Template Conservation																	.	.	.																																									.
Template Sequence		F	G	V	N	I	E	F	S	D	V	N	F	S	Y	H	.	.	.	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R	S	I
Template Known Secondary structure		T															.	.	.		S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S							T	T
Template Predicted Secondary structure																	.	.	.																																									.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	V	P	Q	E	F	N	F	N	P	F	E	T	V	Q	Q	I	V	V	N	Q	A	G	Y	Y	G	V	E	R	K	E	A	Y	I	R	S	E	K	Y	L	K	Q	L	D	L	W	G	K	R	N	E	R	A	R	M	L	S	G	G	M	K	R	R	L	M	I	A	R	A	L	M	H	E	P	K	L	L	I
Query Conservation
Alig confidence															.																																.
Template Conservation															.																																.
Template Sequence		I	G	I	V	P	Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	.	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I
Template Known Secondary structure							S	S					S	S	.	B							T	T	S	T	T													T	T						.			S	T	T	G	G	G		B																		T			S
Template Predicted Secondary structure															.																																.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	P	T	A	G	V	D	I	E	L	R	R	S	M	W	G	F	L	K	D	L	N	D	K	G	T	T	I	I	L	T	T	H	Y	L	E	E	A	E	M	L	C	R	N	I	G	I	I	Q	H	G	E	L	V	E	N	T	S	M	K	A	L	L	A	K	L	K
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																								.
Template Conservation											.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		F	D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	S	S	.	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N	G
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.																S	S	G	G	G	S	T	T	.		S							T	T															T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		179	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions