Job Description P36879 Confidence 99.48% Date Thu Jan 5 11:53:55 GMT 2012 Rank 73 Aligned Residues 172 % Identity 16% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		13	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																													.	.
Query SS confidence														.																													.	.
Query Sequence		T	Y	P	G	G	V	Q	A	L	R	G	I	.	D	L	Q	V	E	A	G	D	F	Y	A	L	L	G	P	N	G	A	G	K	S	T	T	I	G	I	I	S	.	.	S	L	V	N	K	T	S	G	R	V	S	V	F	G	Y	D	L	E	K	D	V	V	N	A	K	R	Q	L	G	L	V	P	Q	E	F	N	F
Query Conservation														.																													.	.
Alig confidence														.																													.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		K	M	R	T	M	I	E	G	F	D	D	I	S	H	G	G	L	P	I	G	R	S	T	L	V	S	G	T	S	G	T	G	K	T	L	F	S	I	Q	F	L	Y	N	G	I	I	E	F	D	E	P	G	V	F	V	T	F	E	E	T	P	Q	D	I	I	K	N	A	R	S	F	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T					T	T	S	S			T	T	S							S	T	T	S	S																									S	S	S										G	G	G	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		N	P	F	E	T	V	Q	Q	I	V	V	N	Q	A	G	Y	Y	G	V	E	R	K	E	A	Y	I	R	S	E	K	Y	L	K	Q	L	D	L	W	G	K	R	N	E	R	A	R	M	L	S	G	G	M	K	R	R	L	M	I	A	R	A	L	M	H	E	P	K	L	L	I	L	D	E	P	T	A	G	V	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	D	L	A	K	L	V	D	E	G	K	L	F	I	L	D	A	S	P	D	P	E	G	Q	E	V	V	G	G	F	D	L	S	A	L	I	E	R	I	N	Y	A	I	Q	K	Y	R	A	R	R	V	S	I	D	S	V	T	S	V	F	Q	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T	S										S	S			S			S	S																		T		S							S	T	T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
				168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.										.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.																			.														.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																			.														.	.	.	.	.	.	.	.	.
Query Sequence		.	.	D	I	E	L	R	R	S	M	W	G	F	L	K	D	L	N	D	K	.	G	T	T	I	I	L	T	T	H	Y	L	E	E	.	.	.	.	.	.	.	.	.	A	E	M	L	C	R	N	I	G	I	I	Q
Query Conservation		.	.																			.														.	.	.	.	.	.	.	.	.
Alig confidence		.	.																			.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	A	S	S	V	V	R	R	E	L	F	R	L	V	A	R	L	K	Q	I	G	A	T	T	V	M	T	T	E	R	I	E	E	Y	G	P	I	A	R	Y	G	V	E	E	F	V	S	D	N	V	V	I	L	R
Template Known Secondary structure		T																					T										S	S	S	S	S		S	S	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions