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Job DescriptionP36879
Confidence97.89%DateThu Jan 5 11:53:55 GMT 2012
Rank103Aligned Residues152
% Identity15%Templatec1szpC_
PDB info PDB header:dna binding proteinChain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.. .......60.........70.........80.........90.........100.
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Query Sequence  VEAGDFYALLGPNGAGKSTTIGIIS. . . . . . SLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVN
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Template Sequence  VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIA. . . . . QRFGLDPDDALNNVAY
Template Known Secondary structure  SSSSTTSSTTS
TTTT

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GGGG.....T


GGG
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   175....180.........190.........200.........210.........220.........230... ......240.........
 
   102.......110.........120.........130.........140.........150.........160.........170.. ....
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Query Sequence  QAGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELR. . . . . RSMW
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Template Sequence  ARAYNADHQLRLLDAAAQMMSE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SRFSLIVVDSVMALYRELSARQMHLAKFM
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STTT.............................S

TTGGG

T
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   250.........260.........270. ........280.........290.........300
 
   177..180..... ....190........ .200.........210...
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Query Sequence  GFLKDLNDK. GTTIILTTHYLEE. AEMLCRNIGIIQHGE
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Template Sequence  RALQRLADQFGVAVVVTNQVGGNIMAHSSTTRLGFKKGK
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   308.310.........320.........330.........340......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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