Return to main results Retrieve Phyre Job Id

Job DescriptionP36879
Confidence96.29%DateThu Jan 5 11:53:55 GMT 2012
Rank275Aligned Residues36
% Identity22%Templatec1f5nA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp.
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50..... ....60.........
Predicted Secondary structure 








..........





Query SS confidence 






















. . . . . . . . . .













Query Sequence  FYALLGPNGAGKSTTIGIISSLV. . . . . . . . . . NKTSGRVSVFGYDL
Query Conservation 
  


 









 
 
  ..........    
 
 
 
   
Alig confidence 






















..........




.







Template Conservation 



 
   



 


 
      
         
 
.

      
Template Sequence  VVAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKG. IWMWCVPH
Template Known Secondary structure  BTTSSTT
SS
S



SSS



S.
Template Predicted Secondary structure 























.
Template SS confidence 














































   40.........50.........60.........70....... ..80.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions