Return to main results Retrieve Phyre Job Id

Job DescriptionP36879
Confidence99.59%DateThu Jan 5 11:53:55 GMT 2012
Rank68Aligned Residues94
% Identity31%Templatec1f2uD_
PDB info PDB header:replicationChain: D: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of rad50 abc-atpase
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140... ......150.........160.........170.........180.........190.
Predicted Secondary structure 


















......
















Query SS confidence 

























. . . . . .















































Query Sequence  EKYLKQLDLWGKRNERARMLSGGMKR. . . . . . RLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIIL
Query Conservation     
    
          

 
   ......
  

 

   
 







  

      
   
      
 



Alig confidence 

























......















































Template Conservation                     





  
 







         





   

      
   
  
      


Template Sequence  ENKVRLFVVWEGKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVIL
Template Known Secondary structure  SSS
TTGGGS
TTTTT



TT

TGGGSS
Template Predicted Secondary structure 

























Template SS confidence 















































































   773......780.........790.........800.........810.........820.........830.........840.........850..
 
   192.......200......... 210..
Predicted Secondary structure 




.

Query SS confidence 

















.


Query Sequence  TTHYLEEAEMLCRNIGII. QHG
Query Conservation   

   
   
 


 

.  
Alig confidence 




.











.


Template Conservation 


  .      
  
 
    
Template Sequence  VSHDE. ELKDAADHVIRISLEN
Template Known Secondary structure 
S
G.GGGGG
SS
SS
Template Predicted Secondary structure 

.





Template SS confidence 





















   853.... ..860.........870...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions