Job Description P76290 Confidence 75.57% Date Thu Jan 5 12:21:35 GMT 2012 Rank 348 Aligned Residues 155 % Identity 16% Template c3pvcA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis Resolution 2.31 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.											.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	Y	D	L	G	C	S	L	G	A	A	T	L	S	V	R	R	.	.	.	.	.	.	.	.	.	.	N	I	H	H	D	N	C	K	I	I	A	I	D	N	S	P	A	M	I	E	R	C	R	R	H	I	D	A	Y	K	A	P	T	P	V	D	V	I	E	G	D	I	R	D	I	A	I	E	N	A	S	M
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	A	E	T	G	F	G	T	G	L	N	F	L	T	L	W	R	D	F	A	L	F	R	Q	Q	S	P	N	A	T	L	R	R	L	H	Y	I	S	F	E	K	Y	P	L	H	V	A	D	L	A	S	A	H	A	R	W	P	E	L	A	S	F	A	E	Q	L	R	A	Q	W	P	L	P	L	A	G	C	H	R
Template Known Secondary structure									T	T	S																		T	T	S	S											S	S												T	T		G	G	G										T						S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		129	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		V	V	L	N	F	.	.	T	L	Q	F	L	E	P	S	E	R	Q	A	L	L	D	K	I	Y	Q	G	L	N	P	G	G	A	L	V	L	S	E	K	F	S	F	E	D	A	K	V	G	E	L	L	F	N	M	H	H	D	F	K	R	A	N	G	Y	S	E	L	E	I	S	Q	K	R	S	M	L	E	N	V	M
Query Conservation							.	.
Alig confidence							.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	L	A	D	G	A	I	T	L	D	L	W	F	G	D	V	N	T	L	L	P	T	L	D	D	S	L	N	N	Q	V	D	A	W	F	L	D	G	F	A	P	N	P	D	X	W	N	E	Q	L	F	N	A	X	A	R	X	T	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	F
Template Known Secondary structure					T	T	T	T								S						G	G	G			G	G	G	T	T									S	S					T	T		S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																.	.	.	.
		207	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	T	D	S	V	E	T	.	H	K	A	R	L	H	N	A	G	F	E	H	S	E	L
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		S	T	F	T	A	A	G	F	V	R	R	G	L	Q	Q	A	G	F	N	V	T	K	V
Template Known Secondary structure				S													T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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