 |
Job Description | P76290 | Confidence | 99.51% | Date | Thu Jan 5 12:21:35 GMT 2012 |
Rank | 91 | Aligned Residues | 176 |
% Identity | 19% | Template | c3ofkA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:nodulation protein s; |
PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah)
|
Resolution | 1.85 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | I | A | R | L | G | D | W | T | F | D | E | R | V | A | E | V | F | P | D | M | I | Q | R | S | V | P | G | Y | S | N | I | I | S | M | I | G | M | L | A | E | R | F | V | Q | . |
. |
P | G | T | Q | V | Y | D | L | G | C | S | L | G | A | A | T | L | S | V | R | R | N | I | H | H | D | N | C | K | I | I | A | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   | . | . | . | . |   |   |   |
|   |   |
|
Template Sequence |   |
P | F | T | M | V | S | V | D | N | T | Y | Q | S | L | E | R | E | L | A | N | D | D | P | W | R | L | D | D | N | P | F | E | R | E | R | H | T | Q | L | L | R | L | S | L | S | S | G | A | V | S | N | G | L | E | I | G | C | A | A | G | A | F | T | E | K | L | A | P | H | . |
. |
. |
. |
C | K | R | L | T | V | I |
Template Known Secondary structure |   |
|
|
|
|
|
|
| S | S |  |  |  |  |  |  |  |  |  | T | S | S | S | G | G | G | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | S |  |  |  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  | G | G | G | . | . | . | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|