Job Description P76290 Confidence 99.44% Date Thu Jan 5 12:21:35 GMT 2012 Rank 106 Aligned Residues 179 % Identity 12% Template c3ndjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product Resolution 1.50 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		S	N	I	I	S	M	I	G	M	L	A	E	R	F	V	.	Q	P	G	T	Q	V	Y	D	L	G	C	S	L	G	A	A	T	L	S	V	R	R	N	I	H	H	D	N	C	K	I	I	A	I	D	N	S	P	A	M	I	E	R	C	R	R	H	I	D	A	Y	K	A	P	T	P	V	D	V	I	E	G	D	I
Query Conservation																	.
Alig confidence																	.																								.	.	.	.																												.
Template Conservation																																									.	.	.	.																												.
Template Sequence		E	H	F	A	M	L	A	R	D	F	L	A	T	E	L	T	G	P	D	P	F	I	V	E	I	G	C	N	D	G	I	M	L	R	T	I	Q	E	A	.	.	.	.	G	V	R	H	L	G	F	E	P	S	S	G	V	A	A	K	A	R	E	K	G	I	R	V	R	T	D	.	F	F	E	K	A	T	A	D	D
Template Known Secondary structure														T	T	T		S	S	S							S		T	T	T	T	T							T	.	.	.	.	T								S										T	T	T						S	.			S
Template Predicted Secondary structure																																									.	.	.	.																												.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	I	A	I	E	N	A	S	M	V	V	L	N	F	T	L	Q	F	L	E	P	S	E	R	Q	A	L	L	D	K	I	Y	Q	G	L	N	P	G	G	A	L	V	L	S	E	K	F	S	F	E	D	A	K	V	G	E	L	L	F	N	M	H	H	D	F	K	R	A	N	G	Y	S	E	L	E	I	S	Q	K
Query Conservation
Alig confidence																						.	.																									.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.																									.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	R	T	E	G	P	A	N	V	I	Y	A	A	N	T	L	C	H	I	.	.	P	Y	V	Q	S	V	L	E	G	V	D	A	L	L	A	P	D	G	V	F	V	F	E	D	.	.	.	P	Y	L	G	D	I	V	A	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F
Template Known Secondary structure																S		G	G	G		.	.	S																								.	.	.										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G
Template Predicted Secondary structure																						.	.																									.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.																				.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		R	S	M	L	E	N	V	M	L	T	D	S	V	E	T	H	K	A	R	L	H	N	A	G	F	E	H	S	E	L	W	F	.	.	.	Q	C	F	N	F	G	S	L	V	A	L	K	A	E	D	A	A
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.
Template Conservation
Template Sequence		D	Q	I	Y	D	E	H	F	F	L	F	S	A	T	S	V	Q	G	M	A	Q	R	C	G	F	E	L	V	D	V	Q	R	L	P	V	H	G	G	E	V	R	Y	T	L	A	R	Q	G	S	R	T	P
Template Known Secondary structure		G	G		S	T	T																T	T	T											G	G	G	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions