Job Description P76290 Confidence 99.74% Date Thu Jan 5 12:21:35 GMT 2012 Rank 23 Aligned Residues 189 % Identity 22% Template c3d2lC_ PDB info PDB header:transferase Chain: C: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of sam-dependent methyltransferase (zp_00538691.1)2 from exiguobacterium sp. 255-15 at 1.90 a resolution Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	D	E	R	V	A	E	V	F	P	D	M	I	Q	R	S	V	P	G	Y	S	N	I	I	S	M	I	G	M	L	A	E	R	F	V	Q	P	G	T	Q	V	Y	D	L	G	C	S	L	G	A	A	T	L	S	V	R	R	N	I	H	H	D	N	C	K	I	I	A	I	D	N	S	P	A	M	I	E	R	C
Query Conservation
Alig confidence						.												.	.														.	.	.	.																								.	.	.	.	.
Template Conservation						.												.	.														.	.	.	.																								.	.	.	.	.
Template Sequence		A	Y	E	Q	.	F	A	Y	V	Y	D	E	L	X	Q	D	.	.	V	P	Y	P	E	W	V	A	W	V	L	E	Q	.	.	.	.	V	E	P	G	K	R	I	A	D	I	G	C	G	T	G	T	A	T	L	L	L	A	D	.	.	.	.	.	H	Y	E	V	T	G	V	D	L	S	E	E	X	L	E	I	A
Template Known Secondary structure		T	T	T	T	.									T	T	T	.	.														.	.	.	.	S		T	T	S						S		T	T									T	.	.	.	.	.	T	S							S
Template Predicted Secondary structure						.												.	.														.	.	.	.																								.	.	.	.	.
Template SS confidence
		2	.	.	.		.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	H	I	D	A	Y	K	A	P	T	P	V	D	V	I	E	G	D	I	R	D	I	A	I	E	N	A	S	M	V	V	L	N	F	T	L	Q	F	L	E	P	.	S	E	R	Q	A	L	L	D	K	I	Y	Q	G	L	N	P	G	G	A	L	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	K	A	X	E	T	N	R	H	V	D	F	W	V	Q	D	X	R	E	L	E	L	P	E	P	V	D	A	I	T	I	L	C	D	S	L	N	Y	L	Q	T	E	A	D	V	K	Q	T	F	D	S	A	A	R	L	L	T	D	G	G	K	L	L	F	D	V	H	S	P	Y	K	X	E	T	L	F	N	G	K
Template Known Secondary structure								T	T										G	G	G				S	S			S						T	T	G	G	G	G			S															S		T	T															T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
																													163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	K	F	S	F	E	D	A	K	V	G	E	L	L	F	N	M	H	H	D	F	K	R	A	N	G	Y	S	E	L	E	I	S	Q	K	R	S	M	L	E	N	V	M	L	T	D	S	V	E	T	H	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	A	T	H	A	E	Q	S	S	Y	I	W	F	A	D	P	G	E	E	P	L	S	V	V	H	E	L	T	F	F	I	E	G	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	Y	D	R	V	D	E	T	H	H	Q	R	T	Y	P	P	E	Q	Y	I
Template Known Secondary structure								S	S											S	S	T	T													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																								.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.									.	.	.	240	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		A	R	L	H	N	A	G	F	E	H	S	E	L	W	F	Q	C	F	N	F	G	.	.	.	.	.	.	.	.	S	L	V	A	L	K
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	W	L	R	E	A	G	F	R	V	C	A	V	T	G	D	F	K	S	D	A	P	T	E	T	A	E	R	I	F	F	V	A	E	K
Template Known Secondary structure							T	T									T	T	S	S	S				T	T		S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions