Return to main results Retrieve Phyre Job Id

Job DescriptionP76290
Confidence31.01%DateThu Jan 5 12:21:35 GMT 2012
Rank392Aligned Residues116
% Identity10%Templatec3bolB_
PDB info PDB header:transferaseChain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60......... 70.........80.........90.........100.........110........
Predicted Secondary structure 








.....






















Query SS confidence 

























. . . . .
















































Query Sequence  SMIGMLAERFVQPGTQVYDLGCSLGA. . . . . ATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI
Query Conservation                  








 .....    
              
                             
Alig confidence 

























.....
















































Template Conservation        
  
   

 



        
   
   
  
      





    
 



    
  





     
Template Sequence  EIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYPGRSLFNSAKVDEEE
Template Known Secondary structure  TT
S
SSGGGS
T
S




SS

S
Template Predicted Secondary structure 






























Template SS confidence 















































































   340.........350.........360.........370.........380.........390.........400.........410.........
 
   119120.........130.........140 .........150.........
Predicted Secondary structure 













......





Query SS confidence 





















. . . . . .


















Query Sequence  RDIAIENASMVVLNFTLQFLEP. . . . . . SERQALLDKIYQGLNPGGA
Query Conservation            
           ......      
  
   




 
Alig confidence 





















......


















Template Conservation        
   


 

 
  
 
 
   
         
      

Template Sequence  LEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDF
Template Known Secondary structure 

S
SSS


STT
Template Predicted Secondary structure 















Template SS confidence 














































   420.........430.........440.........450.........460......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions