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Job Description | P76290 | Confidence | 31.01% | Date | Thu Jan 5 12:21:35 GMT 2012 |
Rank | 392 | Aligned Residues | 116 |
% Identity | 10% | Template | c3bolB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine |
PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+
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Resolution | 1.85 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | M | I | G | M | L | A | E | R | F | V | Q | P | G | T | Q | V | Y | D | L | G | C | S | L | G | A | . |
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A | T | L | S | V | R | R | N | I | H | H | D | N | C | K | I | I | A | I | D | N | S | P | A | M | I | E | R | C | R | R | H | I | D | A | Y | K | A | P | T | P | V | D | V | I | E | G | D | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | I | V | I | K | E | A | K | T | Q | V | E | K | G | A | E | V | L | D | V | N | F | G | I | E | S | Q | I | D | V | R | Y | V | E | K | I | V | Q | T | L | P | Y | V | S | N | V | P | L | S | L | D | I | Q | N | V | D | L | T | E | R | A | L | R | A | Y | P | G | R | S | L | F | N | S | A | K | V | D | E | E | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . |
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119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | D | I | A | I | E | N | A | S | M | V | V | L | N | F | T | L | Q | F | L | E | P | . |
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S | E | R | Q | A | L | L | D | K | I | Y | Q | G | L | N | P | G | G | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | E | M | K | I | N | L | L | K | K | Y | G | G | T | L | I | V | L | L | M | G | K | D | V | P | K | S | F | E | E | R | K | E | Y | F | E | K | A | L | K | I | L | E | R | H | D | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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