Job Description P76290 Confidence 97.96% Date Thu Jan 5 12:21:35 GMT 2012 Rank 256 Aligned Residues 117 % Identity 14% Template c3axtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine Resolution 2.49 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		S	N	I	I	S	M	I	G	M	L	A	E	R	F	V	Q	P	G	T	Q	V	Y	D	L	G	C	S	L	G	A	A	T	L	S	V	R	R	N	I	H	H	D	N	C	K	I	I	A	I	D	N	S	P	A	M	I	E	R	C	R	R	H	I	D	A	Y	K	A	P	T	.	P	V	D	V	I	E	G	D	I
Query Conservation																																																																								.
Alig confidence																																													.																											.
Template Conservation																																													.
Template Sequence		R	D	L	A	V	L	G	L	E	Y	L	C	K	K	L	G	R	P	V	K	V	A	D	P	L	S	A	S	G	I	R	A	I	R	F	L	L	E	T	S	C	V	E	.	K	A	Y	A	N	D	I	S	S	K	A	I	E	I	M	K	E	N	F	K	L	N	N	I	P	E	D	R	Y	E	I	H	G	M	E	A
Template Known Secondary structure																		S							S	S		T	T	T											S				.							S															T	T			G	G	G						S
Template Predicted Secondary structure																																													.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		119	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		R	D	I	A	I	E	N	.	.	.	.	A	S	M	V	V	L	N	F	T	L	Q	F	L	E	P	S	E	R	Q	A	L	L	D	K	I	Y	Q	G	L	N	P	G	G	A	L	V	L	S
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.								.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		N	F	F	L	R	K	E	W	G	F	G	F	D	Y	V	D	L	D	.	.	.	.	.	.	P	F	G	T	P	V	P	F	I	E	S	V	A	L	S	M	K	R	G	G	I	L	S	L	T
Template Known Secondary structure						T	S			S	S									.	.	.	.	.	.		S	S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions