Job Description P76290 Confidence 97.04% Date Thu Jan 5 12:21:35 GMT 2012 Rank 296 Aligned Residues 174 % Identity 18% Template c2zwaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine carboxyl methyltransferase 2; PDBTitle: crystal structure of trna wybutosine synthesizing enzyme2 tyw4 Resolution 1.70 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																		.																							.	.	.	.	.	.																																			.
Query SS confidence																		.																							.	.	.	.	.	.																																			.
Query Sequence		S	N	I	I	S	M	I	G	M	L	A	E	R	F	V	Q	.	P	G	T	Q	V	Y	D	L	G	C	S	L	G	A	A	T	L	S	V	R	R	N	.	.	.	.	.	.	I	H	H	D	N	C	K	I	I	A	I	D	N	S	P	A	M	I	E	R	C	R	R	H	I	D	A	Y	K	A	P	T	P	V	.
Query Conservation																		.																							.	.	.	.	.	.																																			.
Alig confidence																		.																							.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		F	A	I	R	S	R	L	N	S	I	I	E	Q	T	P	Q	D	K	K	I	V	V	V	N	L	G	C	G	Y	D	P	L	P	F	Q	L	L	D	T	N	N	I	Q	S	Q	Q	Y	H	D	R	V	S	F	I	D	I	D	Y	S	D	L	L	K	I	K	I	E	L	I	K	T	I	P	E	L	S	K	I	I	G
Template Known Secondary structure															S		T	T	S								T		T	T										T	T		G	G	G	G	G	G	S	S	S																													T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
																																				112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	I	E	G	D	I	R	D	I	A	I	E	N	A	S	M	V	V	L	N	F	T	L	Q	F	L	E	P	S	E	R	Q	A	L	L	D	K	I	Y	Q	G	L	N	P	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation																																																																													.	.
Template Sequence		L	S	E	D	K	D	Y	V	D	D	S	N	V	D	F	L	T	T	P	K	Y	L	A	R	P	C	D	L	N	D	S	K	M	F	S	T	L	L	N	E	C	Q	L	Y	D	P	N	V	V	K	V	F	V	A	E	V	S	L	A	Y	M	K	P	E	R	S	D	S	I	I	E	A	T	S	K	.	.	M	E	N
Template Known Secondary structure				S	S		S	S		S		T	T							S	S								T	T												T	T	T	T		T	T									S	S	G	G	G	S														T	.	.	S	S	S
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		G	A	L	V	L	S	E	K	F	S	F	E	.	.	D	A	K	V	G	E	L	L	F	N	M	H	H	D	F	K	R	A	N	G	Y	S	E	L	E	I	S	Q	K	R	S	M	L	E	N	V	M	L	T	D	S	V	E	T	H	K	A	R	L	H	N	A	G	F	E	H	S	E	L	W
Query Conservation														.	.
Alig confidence														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	H	F	I	I	L	E	Q	L	I	P	K	G	P	F	E	P	F	S	K	Q	M	L	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	R	N	D	S	P	L	Q	S	V	L	K	Y	N	T	I	E	S	Q	V	Q	R	F	N	K	L	G	F	A	Y	V	N	V	G
Template Known Secondary structure												T	T		T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T					G	G	G	T			S											T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.															.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions