Job Description P76290 Confidence 97.41% Date Thu Jan 5 12:21:35 GMT 2012 Rank 289 Aligned Residues 110 % Identity 15% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	I	I	S	M	I	G	M	L	A	E	R	F	V	Q	P	G	T	Q	V	Y	D	L	G	C	S	L	G	A	A	T	L	S	V	R	R	N	I	H	H	D	N	C	K	I	I	A	I	D	N	S	P	A	M	I	E	R	C	R	R	H	I	D	A	Y	K	A	P	T	P	V	D	V	I	E	G	D	I	R
Query Conservation
Alig confidence														.	.																									.	.	.	.																												.	.
Template Conservation														.	.																									.	.	.	.																												.	.
Template Sequence		Y	Q	A	V	N	L	V	R	K	V	S	E	.	.	L	V	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	.	.	.	.	G	F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	.	.	A	E	F	E	V	A	S	D	R
Template Known Secondary structure														.	.				S	S						T		T	T	T								T	T	.	.	.	.	T								S															T	T			.	.								T	T
Template Predicted Secondary structure														.	.																									.	.	.	.																												.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		D	I	A	I	E	N	A	S	M	V	V	L	N	F	T	L	Q	F	L	E	P	S	E	R	.	.	.	Q	A	L	L	D	K	I	Y	Q	G	L	N	P	G	G	A	L	V	L	S	E	K
Query Conservation																										.	.	.
Alig confidence													.	.	.	.	.	.	.							.	.	.											.
Template Conservation													.	.	.	.	.	.	.																				.
Template Sequence		E	V	S	V	K	G	F	D	T	V	I	.	.	.	.	.	.	.	V	D	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	.	K	P	G	V	I	V	Y	V	S	C	N
Template Known Secondary structure		T				T	T		S				.	.	.	.	.	.	.					T	T		S												.			S							S
Template Predicted Secondary structure													.	.	.	.	.	.	.																				.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.								.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions