Job Description P76290 Confidence 98.81% Date Thu Jan 5 12:21:35 GMT 2012 Rank 194 Aligned Residues 131 % Identity 14% Template c2hteB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine Resolution 2.00 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		I	I	S	M	I	G	M	L	A	E	R	F	V	Q	P	G	T	Q	V	Y	D	L	G	C	S	L	G	A	A	T	L	S	V	R	R	N	I	H	H	D	N	C	K	I	I	A	I	D	N	S	P	A	M	I	E	R	C	.	.	.	.	R	R	H	I	D	A	Y	K	A	P	T	P	V	D	V	I	E	G	D
Query Conservation																																																											.	.	.	.
Alig confidence																																																											.	.	.	.
Template Conservation
Template Sequence		Y	H	E	M	M	T	H	V	P	M	T	V	S	K	E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K
Template Known Secondary structure												T	T	S	S	S										T	T									T		T	T									S																	G	G	G	G	S	T	T						S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	D	I	A	I	E	N	A	S	M	V	V	L	N	F	T	L	Q	F	L	E	P	S	E	R	Q	A	L	L	D	K	I	Y	Q	G	L	N	P	G	G	A	L	V	L	S	E	K	F	S	F	E	D	A	K	V	G	E	L	L	F	N
Query Conservation
Alig confidence																			.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		F	L	E	N	V	T	N	T	Y	D	V	I	I	V	D	S	S	.	.	.	.	.	.	.	D	N	Q	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q	C	E	S	L	W	I	H	V	G	T	I	K	N	M	I	G
Template Known Secondary structure					T			S											.	.	.	.	.	.	.																										T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions