Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9H3
Confidence100.00%DateThu Jan 5 11:10:12 GMT 2012
Rank6Aligned Residues355
% Identity15%Templated1rv3a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210........ .220.........230.........240.........250.........260.... .....270..
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Query Sequence  KEAEQYIARVFNADRSYMVTN. . . . GTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRP. TRNAYGIL
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Template Sequence  TLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYK
Template Known Secondary structure  TT

TTT


SST
TT

GGGT

GGG

B
SS
B
SS
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   273......280.........290.........300.........310.........320... ......330.........340.........350
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Query Sequence  GGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLD. . VKSIHFDSAWVPYTNFSPIYEGKCGMS
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Template Sequence  VNPDTGYIDYDRLEENARLFHPK. . . . . LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGV. . . . . . VP
Template Known Secondary structure  B
TTT
SB


S.....

SS

S


TT

TTTTS......S
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   174.....180.........190...... ...200.........210.........220.........230.........240 ..
 
   351........360.........370.........380..... ....390.........400.........410.........420....
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Query Sequence  GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN. . . . . . EETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRL
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Template Sequence  SPF. . EHCHVVTTTTHKTLRGCRAGMIFYRRGVRSEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEY
Template Known Secondary structure 
GG..GT
SSSGGG


S

SB



B

TTTT

S

TS
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   243.. ....250.........260.........270.........280.........290.........300.........310.........320
 
   425....430.........440.........450.........460.........470.........480.........490.........500....
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Query Sequence  INGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTM
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Template Sequence  QRQVVANCRALSAALVEL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GYKIVTGG. . . SDNHLILVDLRSKGTDG. .
Template Known Secondary structure  T................................T
GGGS...
SSSGGGGT

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   328.330.........340..... ....350... ......360.........370
 
   505....510.........520.........530.. .......540.........550.........560.........570.
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Query Sequence  SDFGIPASIVAKYLDEHGIVVEKTGPYN. . . . . . . . . . . . . LLFLFSIGIDKTKALSLLRALTDFKRAFDLNLRVKNMLP
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Template Sequence  . . . . . . . GRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGP. .
Template Known Secondary structure  .......TT


SS
S
TTS


TT

TT
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   371........380.........390.........400.........410.........420.........430.........440.
 
   572.......580.........590.........600.........610.........620.........630.........640.........650.
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Query Sequence  SLYREDPEFYENMRIQELAQNIHKLIVHHNLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RATLKEFKEKLAG. . . . DEKHQRAVRALRQEVESFAAL
Template Known Secondary structure  ..........................................S

S....
TT
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   442.......450.... .....460.........470.....
 
   652. ....
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Query Sequence  YP. PGVP
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Template Sequence  FPLPGLP
Template Known Secondary structure  S


SSS
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   476...480..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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