Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9H3
Confidence99.79%DateThu Jan 5 11:10:12 GMT 2012
Rank64Aligned Residues366
% Identity16%Templated1pmma_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150..... ....160.........170.........180.........190.........200.........210
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Query Sequence  KALFKYVREGKYTFCTPGHMGG. . . TAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIARVFNA
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Template Sequence  DVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQS. . . . . . . . . AAIDLRCVNMVADLWHA
Template Known Secondary structure  GGGS

GGGB
S

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TTT
BTT
TTTS.........TT
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   40.........50.........60.........70.........80.........90... ......100.........110
 
   211.. ......220.........230. ........240.........250.........260.........270..
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Query Sequence  DRS. . . . . . YMVTNGTSTANKIVGMYS. . . . . . . . . . . . APAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGIL
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Template Sequence  PAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFM.
Template Known Secondary structure 


TTS

SSST


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TT



BTTB
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   111........120.........130.........140.........150.........160.........170.........180.........
 
   273......280.........290.........300...... ...310.........320..... ....330.........340...
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Query Sequence  GGIPQSEFQHATIAKRVKETPNATWPVHAVITNS. TYDGLLYNTDFIKKTLDVK. . . . . . . . SIHFDSAWVPYTNFSPIY
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Template Sequence  . . . . . . . . DPKRMIEACDENTIG. . . . . VVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVA.
Template Known Secondary structure  ........


TT.....
BBS
TTT
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TTGGGT
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   190.........200.... .....210.........220.........230.........240.........250.....
 
   344.....350.........360.........370.........380... ......390.........400... ......410....
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Query Sequence  EGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD. VNEETFNEAYMMHTTTSPHY. . . . . . . . GIVASTETAAA
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Template Sequence  . . . PDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFL
Template Known Secondary structure  ...TT


STTSTTTTTTT


SS
SSGGGS
GGG
TT

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   256...260.........270.........280.........290.........300.........310.........320.........330..
 
   415....420.........430.........440.........450.........460.........470.........480.........490....
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Query Sequence  MMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLL
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Template Sequence  RLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DEGIPAVC
Template Known Secondary structure  TTS


T.................................TTBSS
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   333......340.........350.........360.........370. ........
 
   495....500.........510.........520...... ...530.........540.........550.........560...
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Query Sequence  TPGMEKDGTMSDFGIPASIVAKYLDEHGIVVE. . . . . . . KTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAFDLN
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Template Sequence  FKLKDGED. . . . PGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDH
Template Known Secondary structure 
TT

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SS
TTT
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TT
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   380....... ..390.........400.........410.........420.........430.........440.........450.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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