Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9H3
Confidence99.83%DateThu Jan 5 11:10:12 GMT 2012
Rank45Aligned Residues355
% Identity12%Templated1js3a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.. .......170.........180.........190.........200. .....
Predicted Secondary structure 


















...













..
Query SS confidence 






























. . .






































. .




Query Sequence  LTKALFKYVREGKYTFCTPGHMGGTAFQKSP. . . VGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAE. . QYIAR
Query Conservation 
  

  
       

 





     
 ...       
 


    




  


 
  
 
 
 


.. 


 
Alig confidence 






























...


















...........








..




Template Conservation                    
                        
 
      
...........
     
      
  
Template Sequence  ILQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAAS. . . . . . . . . . . PACTELETVMMDWLGK
Template Known Secondary structure  TTGGG


TTSTTB
SSS








SSGGG
...........
Template Predicted Secondary structure 





















...........
Template SS confidence 















































































   56...60.........70.........80.........90.........100........ .110.........120....
 
   207..210..... ....220.........230. ........240.........250.......
Predicted Secondary structure 



..........

...................









Query SS confidence 








. . . . . . . . . .















. . . . . . . . . . . . . . . . . . .

























Query Sequence  VFNADRSYM. . . . . . . . . . VTNGTSTANKIVGMYS. . . . . . . . . . . . . . . . . . . APAGSTILIDRNCHKSLTHLMMMSDV
Query Conservation   


  
 
..........





 

 
 
 
 ...................   

 


 






  

 



Alig confidence 








..........















...................

























Template Conservation 
 
 
            
  
 


 

  

  

                       

  
  

 

 


   
 
Template Sequence  MLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV
Template Known Secondary structure  TT

GGG

TTT
S
S
STT

TT

T
Template Predicted Secondary structure 






































Template SS confidence 















































































   125....130.........140.........150.........160.........170.........180.........190.........200....
 
   258.260.........270.........280.........290... ......300...... ...310.........320...... ...330...
Predicted Secondary structure 
















.






.











..


Query SS confidence 



































.












.



















. .






Query Sequence  TPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETP. NATWPVHAVITNS. TYDGLLYNTDFIKKTLDVKS. . IHFDSAW
Query Conservation   



 
     
  
 
    
    
  

   
. 
  
   




.

 

  

  
 
  
   ..






Alig confidence 






..





........












.












.



















..






Template Conservation   
  

 ..
    
........
   
   
      
  
  

   


 

 



  
  
    
  





 
Template Sequence  KLKAIPS. . DGKFAM. . . . . . . . RASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAY
Template Known Secondary structure 

..
TTS

........
TT
BS
TTT

B

TT

TT
Template Predicted Secondary structure  ..





........




















Template SS confidence 















































































   205....210. ...... ..220.........230.........240.........250.........260.........270....
 
   334.....340.........350.........360.........370.........380.........390... ......400...
Predicted Secondary structure 

































..........





Query SS confidence 



























































. . . . . . . . . .









Query Sequence  VPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAY. . . . . . . . . . MMHTTTSPHY
Query Conservation 


  


       

  

  


 













 
 


   
       

..........   






Alig confidence 









.....


































...






..........









Template Conservation 
         .....         



    

 
  
 
   
  
  ...  
                   

   
Template Sequence  AGSAFICPEF. . . . . RHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRR. . . TDLTGAFKSGLITDYRHWQLPLGRRFR
Template Known Secondary structure  GGGGGGSTTT.....GGGGTTGGG
S
SS

SS
S
...GGG


S


GGGSSS
S



T
Template Predicted Secondary structure 




.....




















...

















Template SS confidence 















































































   275....280.... .....290.........300.........310......... 320.........330.........340......
 
   404.....410.........420.........430.........440.........450.........460.........470.........480...
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  GIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEH
Query Conservation   





 

  
  
 
  
    
  
  

  
                   
               
        
Alig confidence 

..









































..................................
Template Conservation 

..     
   
  
          

  
   
       
  ..................................
Template Sequence  SL. . KMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ..
TT
S..................................
Template Predicted Secondary structure  ..






..................................
Template SS confidence 















































































   359360 .........370.........380.........390.........400..
 
   484.....490.........500.........510.........520.........530...... . ..540.........550.........
Predicted Secondary structure 





















....




Query SS confidence 




















































. . .
.





















Query Sequence  MYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFL. . . F. SIGIDKTKALSLLRALTDFKRA
Query Conservation    


 

 
     
  
     

 
  
  

   

  
      

 
... .


 
      
  

  
   
Alig confidence  ...



















......























...
.





















Template Conservation  ...     

 
           ......
   
   
   
  
       


      

 



  
  
     
Template Sequence  . . . EVTLGLVCFRLKGSDGLNEA. . . . . . LLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAE
Template Known Secondary structure  ...


SSSS
......TS
B
TT


TT

Template Predicted Secondary structure  ...








......














Template SS confidence 















































































   403......410.........420.. .......430.........440.........450.........460.........470...
 
   560
Predicted Secondary structure 
Query SS confidence 
Query Sequence  F
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  L
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   474
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions