Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9H3
Confidence100.00%DateThu Jan 5 11:10:12 GMT 2012
Rank7Aligned Residues351
% Identity15%Templated1bj4a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AEQYIARVFNADRSYMVTN. . . . GTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRP. TRNAYGILGG
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Template Sequence  CQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVN
Template Known Secondary structure  TT

TTT


SST
TT

GGGT

GGG

B
SS
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B
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   275....280.........290.........300.........310.........320... ......330.........340.........350..
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Query Sequence  IPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLD. . VKSIHFDSAWVPYTNFSPIYEGKCGMSGG
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Template Sequence  PDTGYINYDQLEENARLFHPK. . . . . LIIAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAG. . . . . . . VVPS
Template Known Secondary structure  TTT
SB


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SS

S


TT

GGGTT.......SS

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   176...180.........190...... ...200.........210.........220.........230......... 240...
 
   353......360.........370.........380... ......390.........400.........410.........
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Query Sequence  RVEGKVIYETQSTHKLLAAFSQASMIHVKGD. . . . . . . . . . . . . VNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGN
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Template Sequence  PFE. HCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPATGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTL
Template Known Secondary structure  GGG.T
SSSGGG


S

S
TTT



TTTT

S

TTS
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   244.. ...250.........260.........270.........280.........290.........300.........310.........320..
 
   420.........430.........440.........450.........460.........470.........480.........490.........
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Query Sequence  AGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGME
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Template Sequence  EFKVYQHQVVANCRALSEALTE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGYKIVTGG. . . SDNHLILVDLRSKG
Template Known Secondary structure  ................................TT
TTSS...
SSSGGGGT
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   323......330.........340.... .....350... ......360.......
 
   500.........510.........520.........530.. .......540.........550.........560......
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Query Sequence  KDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYN. . . . . . . . . . . . . LLFLFSIGIDKTKALSLLRALTDFKRAFDLNLRV
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Template Sequence  TDG. . . . . . . . . GRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSD
Template Known Secondary structure 

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TT
S
TTS


TT

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   368.370 .........380.........390.........400.........410.........420.........430........
 
   567..570.........580.........590.........600.........610.........620.........630.........640......
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Query Sequence  KNMLPSLYREDPEFYENMRIQELAQNIHKLIVHHNLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINA
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Template Sequence  TGV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AATLKEFKERLA. . . . . GDKYQAAVQALREEVE
Template Known Secondary structure  T
S............................................S

S.....SSTT
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   439440. ........450... ......460.........
 
   647..650... ...
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Query Sequence  NMILPYP. PGV
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Template Sequence  SFASLFPLPGL
Template Known Secondary structure  TTS

S

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   470.........480
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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