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Job DescriptionP0A9H3
Confidence99.83%DateThu Jan 5 11:10:12 GMT 2012
Rank44Aligned Residues304
% Identity15%Templatec3uwcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:nucleotide-sugar aminotransferase; PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  SLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNA
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Template Sequence  ADFTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAXSFKXLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSENGY
Template Known Secondary structure  T

SS
TT
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TT
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TT

B
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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   269270.........280.........290.........300.........310.........320...... ...330.........340......
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Query Sequence  YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS. . IHFDSAWVPYTNFSPIYEGK
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Template Sequence  VID. . . . . . . . . . . . . . . . . PEKIEAAITDKTKAIXPVHYTGNIADXPALAKIAKKHNLHIVEDACQTILGRIND. . . . .
Template Known Secondary structure  SB
.................GGGTGGG

TT

B
GGG



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   109110. ........120.........130.........140.........150.........160......
 
   347..350.........360.........370.........380.........390..... ....400.........410......
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Query Sequence  CGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMM. . . . . . . . . . HTTTSPHYGIVASTETAAAMM
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Template Sequence  . . . KFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRXDTIQAVIANRL. . .
Template Known Secondary structure  ...TTSSSS
SSSSSS

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TBTTTTSS


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   167..170.........180.........190.........200.........210.........220.........230.........240
 
   417..420.........430.........440.........450.........460.........470.........480.........490......
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Query Sequence  KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTP
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Template Sequence  . XNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . VFHIYVL. . .
Template Known Secondary structure  .GGGTGGGTTT




TT
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   241........250.........260.........270.........280 .......
 
   497..500.........510.........520.........530. ........540.........
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Query Sequence  GMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPY. . . . . . . . . . . . . . . . . . . . . . . . . . . NLLFLFSIGIDKTKALSL
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Template Sequence  . . . . . . . . . . RVKYRDQLFQYLKDNGIEVKIHYPIAXHLQPAAKSLGYQQGDFPXAEKHGEAVITLPAHPYLTEEEINYI
Template Known Secondary structure  ..........TTTTB

B
S
SS
GGGSGGGGGG


TTS



TTS
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   288.290.........300.........310.........320.........330.........340.........350.......
 
   550.........560...
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Query Sequence  LRALTDFKRAFDLN
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Template Conservation 
  
     
    
Template Sequence  IKKVREFYLEKHYN
Template Known Secondary structure  TTTT
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   358.360.........370.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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