Job Description P0A9H3 Confidence 99.83% Date Thu Jan 5 11:10:12 GMT 2012 Rank 44 Aligned Residues 304 % Identity 15% Template c3uwcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nucleotide-sugar aminotransferase; PDBTitle: structure of an aminotransferase (degt-dnrj-eryc1-strs family) from2 coxiella burnetii in complex with pmp Resolution 1.80 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	D	H	S	G	P	H	K	E	A	E	Q	Y	I	A	R	V	F	N	A	D	R	S	Y	M	V	T	N	G	T	S	T	A	N	K	I	V	G	M	Y	S	A	P	A	G	S	T	I	L	I	D	R	N	C	H	K	S	L	T	H	L	M	M	M	S	D	V	T	P	I	Y	F	R	P	T	R	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	F	T	L	G	A	E	L	E	K	F	E	K	R	F	A	A	L	H	N	A	P	H	A	I	G	V	G	T	G	T	D	A	L	A	X	S	F	K	X	L	N	I	G	A	G	D	E	V	I	T	C	A	N	T	F	I	A	S	V	G	A	I	V	Q	A	G	A	T	P	V	L	V	D	S	E	N	G	Y
Template Known Secondary structure		T			S	S															T	T		S						S													T	T			T	T							S	S	S											T	T								B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		Y	G	I	L	G	G	I	P	Q	S	E	F	Q	H	A	T	I	A	K	R	V	K	E	T	P	N	A	T	W	P	V	H	A	V	I	T	N	S	T	Y	D	G	L	L	Y	N	T	D	F	I	K	K	T	L	D	V	K	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	N	F	S	P	I	Y	E	G	K
Query Conservation																																																												.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.																.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template Sequence		V	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	K	I	E	A	A	I	T	D	K	T	K	A	I	X	P	V	H	Y	T	G	N	I	A	D	X	P	A	L	A	K	I	A	K	K	H	N	L	H	I	V	E	D	A	C	Q	T	I	L	G	R	I	N	D	.	.	.	.	.
Template Known Secondary structure		S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	G	G	G			T	T							B		G	G	G															T	T								T	T		T	T				T	T	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template SS confidence
		109	110	.																		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.											.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	M	S	G	G	R	V	E	G	K	V	I	Y	E	T	Q	S	T	H	K	L	L	A	A	F	S	Q	A	S	M	I	H	V	K	G	D	V	N	E	E	T	F	N	E	A	Y	M	M	.	.	.	.	.	.	.	.	.	.	H	T	T	T	S	P	H	Y	G	I	V	A	S	T	E	T	A	A	A	M	M
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																															.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation		.	.	.																																																																											.	.	.
Template Sequence		.	.	.	K	F	V	G	S	W	G	Q	F	A	C	F	S	L	H	P	L	K	N	L	N	V	W	S	D	A	G	V	I	I	T	H	S	D	E	Y	A	E	K	L	R	L	Y	R	N	H	G	L	I	N	R	D	V	C	V	E	Y	G	I	N	C	R	X	D	T	I	Q	A	V	I	A	N	R	L	.	.	.
Template Known Secondary structure		.	.	.			T	T	S	S	S	S							S	S	S	S	S	S			S	S								S												T	B	T	T				T	T			S	S				B		B													.	.	.
Template Predicted Secondary structure		.	.	.																																																																											.	.	.
Template SS confidence
					167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	N	A	G	K	R	L	I	N	G	S	I	E	R	A	I	K	F	R	K	E	I	K	R	L	R	T	E	S	D	G	W	F	F	D	V	W	Q	P	D	H	I	D	T	T	E	C	W	P	L	R	S	D	S	T	W	H	G	F	K	N	I	D	N	E	H	M	Y	L	D	P	I	K	V	T	L	L	T	P
Query Conservation
Alig confidence		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Sequence		.	X	N	Q	L	E	T	I	T	E	K	R	R	G	I	A	H	L	Y	D	Q	S	F	V	D	L	S	E	F	I	D	V	P	V	R	R	E	G	V	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	H	I	Y	V	L	.	.	.
Template Known Secondary structure		.	G	G	G																			T	G	G	G	T	T	T								T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S				.	.	.
Template Predicted Secondary structure		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template SS confidence
			241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																														.	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.																												.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	E	K	D	G	T	M	S	D	F	G	I	P	A	S	I	V	A	K	Y	L	D	E	H	G	I	V	V	E	K	T	G	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	L	S	L
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	V	K	Y	R	D	Q	L	F	Q	Y	L	K	D	N	G	I	E	V	K	I	H	Y	P	I	A	X	H	L	Q	P	A	A	K	S	L	G	Y	Q	Q	G	D	F	P	X	A	E	K	H	G	E	A	V	I	T	L	P	A	H	P	Y	L	T	E	E	E	I	N	Y	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			T	T											T	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G	G				T	T	S																		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	L	T	D	F	K	R	A	F	D	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	K	V	R	E	F	Y	L	E	K	H	Y	N
Template Known Secondary structure											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions