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Job DescriptionP0A9H3
Confidence99.49%DateThu Jan 5 11:10:12 GMT 2012
Rank168Aligned Residues319
% Identity13%Templatec3mebB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: structure of cytoplasmic aspartate aminotransferase from giardia2 lamblia
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210.. .......220......... 230.........240.........250....... .
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Query Sequence  DHSGPHKEAEQYIARVFNADR. . . . . . . . SYMVTNGTSTANKIVGM. . YSAPAGSTILIDRNCHKSLTHLMMMSDV. . . T
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Template Sequence  PVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKV
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TT


TT
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S
TT

SS

T
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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   259260.........270.........280.........290.........300...... ...310.... .....320.. .......330..
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Query Sequence  PIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS. TYDGLLYN. . . TDFIKKTL. . DVKSIHFDSA
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Template Sequence  PYKEYTYLRKDGEL. . . . . . EIDFSNTKKDIQSAPEKSIF. . LFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSA
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B
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S......SB
S
TT
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TTT




T
S
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   151........160.... .....170.........180.... .....190.........200.........210.........220..
 
   333......340.........350.........360........ .370.........380... ......390...... ..
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Query Sequence  WVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKL. . LAAFSQASMIHVKGD. VNEETFNEAYMMH. . . . . . . . . . . TT
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Template Sequence  . YQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTW
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TT


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   223......230.........240.........250.........260.........270.........280.........290.........300.
 
   399400.........410.........420.........430.........440.........450.........460.........470........
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Query Sequence  TSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKN
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Template Sequence  SMSA. . . IHGAYIVQVIVHDK. . . RLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTF. .
Template Known Secondary structure  SS

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   302... ....310......... 320.........330.........340.........350.........360.........370...
 
   479480.........490.........500.........510.........520.........530......... 540.........550.......
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Query Sequence  IDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSI. GIDKTKALSLLRALTDFK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . TGLTPEHVDYLKEKWSIYLVKAGG. . . . . RMSMCGLTESNCDYVAEAIHDAV
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BTGGG.....GGG

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   374.....380.........390....... ..400.........410.........420
 
   558.560
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Query Sequence  RAF
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Template Sequence  TKL
Template Known Secondary structure  S
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   421..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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