Job Description P0A9H3 Confidence 99.79% Date Thu Jan 5 11:10:12 GMT 2012 Rank 63 Aligned Residues 324 % Identity 14% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	C	T	P	G	H	M	G	G	T	A	F	Q	K	S	P	V	G	S	L	F	Y	D	F	F	G	P	N	T	M	K	S	D	I	S	I	S	V	S	E	L	G	S	L	L	D	H	S	G	P	H	K	E	A	E	Q	Y	I	A	R	V	F	N	A	D	R	S	Y	M	V	T	N	G	T	S	T	A	N	K
Query Conservation
Alig confidence									.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	Q	I	S	G	H	.	G	K	R	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	L	K	T	A	F	A	A	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	F	E	Q	K	F	A	D	V	L	G	X	D	D	A	V	F	F	P	S	G	T	X	A	Q	Q	V
Template Known Secondary structure		S			S	S	B	S	.	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S		T	T						T	T			T	T												T	T		S						S
Template Predicted Secondary structure									.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.		.	20	.	.	.															.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure													.																.	.	.
Query SS confidence													.																.	.	.
Query Sequence		I	V	G	M	Y	S	A	P	A	G	S	.	T	I	L	I	D	R	N	C	H	K	S	L	T	H	L	.	.	.	M	M	M	S	D	V	T	P	I	Y	F	R	P	T	R	N	A	Y	G	I	L	G	G	I	P	Q	S	E	F	Q	H	A	T	I	A	K	R	V	K	E	T	P	N	A	T	W	P	V	H	A
Query Conservation													.																.	.	.
Alig confidence													.																.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		A	L	R	I	W	S	D	E	T	D	N	R	T	V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	T	I	L	V	G	A	A	D	R	L	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	E	I	K	A	L	P	D	I	A	C	.	L	L	L
Template Known Secondary structure											T								T	T						S	S	T	T						S	S							S		T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S		S		.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140
		302	.	.	.	.	.	.	.	310	.	.				.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure													.	.	.											.	.
Query SS confidence													.	.	.											.	.
Query Sequence		V	I	T	N	S	T	Y	D	G	L	L	.	.	.	Y	N	T	D	F	I	K	K	T	L	.	.	D	V	K	S	I	H	F	D	S	A	W	V	P	Y	T	N	F	S	P	I	Y	E	G	K	C	G	M	S	G	G	R	V	E	G	K	V	I	Y	E	T	Q	S	T	H	K	L	L	A	A	F	S	Q	A	S
Query Conservation													.	.	.											.	.
Alig confidence													.	.	.											.	.																					.	.	.	.	.	.																								.	.
Template Conservation																																																.	.	.	.	.	.																								.	.
Template Sequence		E	L	P	Q	R	E	I	G	G	V	A	P	A	F	S	E	L	E	T	I	S	R	Y	C	R	E	R	G	I	R	L	H	L	D	G	A	R	L	F	E	X	L	P	Y	Y	E	.	.	.	.	.	.	K	T	A	A	E	I	A	G	L	F	D	S	I	Y	I	S	F	Y	G	L	G	G	I	.	.	A	G	A
Template Known Secondary structure			S	S	B	G	G	G	T	S	B																		T								T	T									T	.	.	.	.	.	.								T	T		S												S	.	.	S
Template Predicted Secondary structure																																																.	.	.	.	.	.																								.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	H	V	K	G	D	V	N	E	E	T	F	N	E	A	Y	M	M	H	T	T	T	S	P	H	Y	G	I	V	A	S	T	E	T	A	A	A	M	M	K	G	N	A	G	K	R	L	I	N	G	S	I	E	R	A	I	K	F	R	K	E	I	K	R	L	R	T	E	S	D	G	W	F	F	D	V	W	Q	P
Query Conservation
Alig confidence																																													.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		I	L	A	G	P	A	A	F	C	Q	T	A	R	I	W	K	R	R	Y	G	G	D	L	I	S	L	Y	P	Y	I	V	S	A	D	Y	Y	Y	E	L	R	K	D	R	.	.	.	.	.	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	V	H	T	T	P	.	.	.	.	.	.	.
Template Known Secondary structure																					T				S																	T	T		.	.	.	.	.																		S	T	T					S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.				.	.	.	.	530	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		D	H	I	D	T	T	E	C	W	P	L	R	S	D	S	T	W	H	G	F	K	N	I	D	N	E	H	M	Y	L	D	P	I	K	V	T	L	L	T	P	G	M	E	K	D	G	T	M	S	D	F	G	I	P	A	S	I	V	A	K	Y	L	D	E	H	G	I	V	V	.	.	.	E	K	T	G	P	Y	N	L
Query Conservation																																																																							.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	P	V	S	N	X	F	H	L	H	F	D	G	Q	A	A	D	I	S	.	.	.	.	.	P	K	L	E	Q	V	Q	E	E	T	G	L	G	F	V	G	Y	L	V	D	K	D	G	Y	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S	S								S							.	.	.	.	.														S		S						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
																																282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		534	.	.	.	.	.	540						.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		L	F	L	F	S	I	G	.	.	.	.	.	I	D	K	T	K	A	L	S	L	L	R	A	L	T	D
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q
Template Known Secondary structure							B						T	S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions