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Job DescriptionP0A9H3
Confidence99.49%DateThu Jan 5 11:10:12 GMT 2012
Rank167Aligned Residues300
% Identity13%Templatec3lvmB_
PDB info PDB header:transferaseChain: B: PDB Molecule:cysteine desulfurase; PDBTitle: crystal structure of e.coli iscs
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PHKEAEQYIARVFNADRS. YMVTNGTSTANKIVGMYSA. . . . PAGSTILIDRNCHKSLTHL. . . MMMSDVTPIYFRPTRN
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Template Sequence  AVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRN
Template Known Secondary structure  T

GGGSSTTTT

TTS
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TT
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   268.270.........280.........290.........300...... ...310.........320... ......330.........340....
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Query Sequence  AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS. TYDGLLYNTDFIKKTLD. . VKSIHFDSAWVPYTNFSPIYE
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Template Sequence  G. . . . . . . . . . IIDLKELEAAMRDDTIL. . . . . VSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGK. . . . . . .
Template Known Secondary structure  S..........




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SB
TTT
BB

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   130 .........140....... ..150.........160.........170.........180.......
 
   345....350.........360.........370.........380... ......390.........400.........410.........
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Query Sequence  GKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD. . . . . VNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGN
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Template Sequence  . . . . LPIDLSQLKVDLMSFSGHKIYGPKG. IGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEE
Template Known Secondary structure  ....S


TTTS

SSTTTTS
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BTTB




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S


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   188.190.........200.........210.. .......220.........230.........240.........250.........260..
 
   420.........430.........440.........450.........460.........470.........480.........490.........
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Query Sequence  AGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGME
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Template Sequence  . MATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . APNILNVSF. . . .
Template Known Secondary structure  .TTSTTS
SSSB................................
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   263......270.........280.........290...... ...300.....
 
   500.........510.........520... ......530.........540.........550.........560...
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Query Sequence  KDGTMSDFGIPASIVAKYLDEHGI. . . . . . . . . . . . . . . . VVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAFDLN
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Template Sequence  . . . . . . . NYVEGESLIMALKDLAVSSGSALEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDL
Template Known Secondary structure  .......TTS
TTT
B







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   306...310.........320.........330.........340.........350.........360.........370........
 
   564..
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Query Sequence  LRV
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Template Sequence  SPL
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   384..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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