Job Description P0A9H3 Confidence 30.33% Date Thu Jan 5 11:10:12 GMT 2012 Rank 402 Aligned Residues 81 % Identity 9% Template c3l6uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc-type sugar transport system periplasmic PDBTitle: crystal structure of abc-type sugar transport system,2 periplasmic component from exiguobacterium sibiricum Resolution 1.90 Å

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		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure									.																																								.	.	.	.	.
Query SS confidence									.																																								.	.	.	.	.
Query Sequence		N	V	I	A	I	L	N	.	H	M	G	V	Y	F	K	E	E	P	I	R	E	L	H	R	A	L	E	R	L	N	F	Q	I	V	Y	P	N	D	R	D	D	L	L	K	L	I	E	.	.	.	.	.	N	N	A	R	L	C	G	V	I	F	D	W	D	K	Y	N	L	E	L	C	E	E	I	S	K	M	N	E
Query Conservation									.																																								.	.	.	.	.
Alig confidence									.																																								.	.	.	.	.
Template Conservation
Template Sequence		N	I	V	G	F	T	I	V	N	D	K	H	E	F	A	Q	R	L	I	N	A	F	K	A	E	A	K	A	N	K	Y	E	A	L	V	A	T	S	Q	N	S	R	I	S	E	R	E	Q	I	L	E	F	V	H	L	K	V	D	A	I	F	I	T	T	L	D	D	V	Y	I	G	S	A	I	E	E	A	K	K	A
Template Known Secondary structure									S		S		S																	T	T									S	S															T	T		S							S		T	T	T	T										T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	P	L	Y	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	P	V	F	A	I
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions