Job Description P0A9H3 Confidence 99.97% Date Thu Jan 5 11:10:12 GMT 2012 Rank 14 Aligned Residues 336 % Identity 12% Template c3hl2D_ PDB info PDB header:transferase Chain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex Resolution 2.81 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																			.	.	.						.
Query SS confidence																					.	.																			.	.	.						.
Query Sequence		P	H	K	E	A	E	Q	Y	I	A	R	V	F	N	A	D	R	S	Y	.	.	M	V	T	N	G	T	S	T	A	N	K	I	V	G	M	Y	S	A	.	.	.	P	A	G	S	T	.	I	L	I	D	R	N	C	H	K	S	L	T	H	L	M	M	M	S	D	V	T	P	I	Y	F	R	P	T	R	N	A	Y
Query Conservation																					.	.																			.	.	.						.
Alig confidence																					.	.																			.	.	.						.
Template Conservation
Template Sequence		I	T	N	S	L	V	L	D	I	I	K	L	A	G	V	H	T	V	A	N	C	F	V	V	P	M	A	T	G	M	S	L	T	L	C	F	L	T	L	R	H	K	R	P	K	A	K	Y	I	I	W	P	R	I	D	Q	K	S	C	F	K	S	M	I	T	A	G	F	E	P	V	V	I	E	N	V	L	E	G	D
Template Known Secondary structure															T		T	T								S	S																		T	T																					T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																										.															.	.
Query SS confidence																																										.															.	.
Query Sequence		G	I	L	G	G	I	P	Q	S	E	F	Q	H	A	T	I	A	K	R	V	K	E	T	P	N	A	T	W	P	V	H	A	V	I	T	N	S	T	Y	D	.	G	L	L	Y	N	T	D	F	I	K	K	T	L	D	.	.	V	K	S	I	H	F	D	S	A	W	V	P	Y	T	N	F	S	P	I	Y	E	G	K
Query Conservation																																										.															.	.
Alig confidence				.	.	.	.	.	.	.																				.												.															.	.																				.	.	.	.
Template Conservation				.	.	.	.	.	.	.																				.																																																.	.	.	.
Template Sequence		E	L	.	.	.	.	.	.	.	R	T	D	L	K	A	V	E	A	K	V	Q	E	L	G	P	D	C	I	.	L	C	I	H	S	T	T	S	C	F	A	P	R	V	P	D	R	L	E	E	L	A	V	I	C	A	N	Y	D	I	P	H	I	V	N	N	A	Y	G	V	Q	S	S	K	C	M	H	.	.	.	.
Template Known Secondary structure				.	.	.	.	.	.	.																G	G	G		.							S	S			T	T	B																T								T	T		T	T							.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.																				.																																																.	.	.	.
Template SS confidence
		197	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		C	G	M	S	G	G	R	V	E	G	K	.	V	I	Y	E	T	Q	S	T	H	K	L	L	A	A	F	S	Q	A	S	M	I	H	V	K	G	D	V	N	E	E	T	F	N	E	A	Y	M	M	H	T	T	T	S	P	H	Y	G	I	V	A	S	T	E	T	A	A	A	M	M	K	G	N	A	G	K	R	L	I
Query Conservation													.
Alig confidence		.	.										.																																																												.	.	.	.
Template Conservation		.	.																																																																						.	.	.	.
Template Sequence		.	.	L	I	Q	Q	G	A	R	V	G	R	I	D	A	F	V	Q	S	L	D	K	N	F	M	V	P	V	G	G	A	I	I	A	G	F	N	D	S	F	I	Q	E	I	S	K	M	Y	P	G	R	A	S	A	S	P	S	L	D	V	L	I	T	L	L	S	L	G	S	N	G	.	.	.	.	Y	K	K	L	L
Template Known Secondary structure		.	.									S													S				S	S							S											T	S		S		B		S																		.	.	.	.
Template Predicted Secondary structure		.	.																																																																						.	.	.	.
Template SS confidence
				265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	S	I	E	R	A	I	K	F	R	K	E	I	K	R	L	R	T	E	S	D	G	W	F	F	D	V	W	Q	P	D	H	I	D	T	T	E	C	W	P	L	R	S	D	S	T	W	H	G	F	K	N	I	D	N	E	H	M	Y	L	D	P	I	K	V	T	L	L	T	P	G	M	E	K	D	G	T	M	S
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	R	K	E	M	F	S	Y	L	S	N	Q	I	K	K	L	S	E	A	Y	N	E	R	L	L	H	T	P	H	N	P	I	S	L	A	M	T	L	K	T	L	D	E	H	R	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	T	Q	L	G	S	M	L	F	T	R	Q	V	S	G	A	R	V
Template Known Secondary structure																						T	T			B				T	T		S	S							T	T			T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.												T	T			S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.														.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		D	F	G	I	P	A	S	I	V	A	K	Y	L	D	E	.	H	G	I	V	V	E	K	T	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	L	S	L	L	R	A	L	T	D	F	K	R	A	F	D	L
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		V	P	L	G	S	M	Q	T	V	S	G	Y	T	F	R	G	F	M	S	H	T	N	N	Y	P	C	A	Y	L	N	A	A	S	A	I	G	M	K	M	Q	D	V	D	L	F	I	K	R	L	D	R	C	L	K	A	V	R	K
Template Known Secondary structure				S	S						T	T					S	T	T	T	T	S	S			S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions