Job Description P0A9H3 Confidence 99.69% Date Thu Jan 5 11:10:12 GMT 2012 Rank 91 Aligned Residues 355 % Identity 13% Template c2qmaB_ PDB info PDB header:transferase Chain: B: PDB Molecule:diaminobutyrate-pyruvate transaminase and l-2,4- PDBTitle: crystal structure of glutamate decarboxylase domain of2 diaminobutyrate-pyruvate transaminase and l-2,4-diaminobutyrate3 decarboxylase from vibrio parahaemolyticus Resolution 1.81 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		L	T	K	A	L	F	K	Y	V	R	E	G	K	Y	T	F	C	T	P	.	.	.	G	H	M	G	G	T	A	F	Q	K	S	P	V	G	S	L	F	Y	D	F	F	G	P	N	T	M	K	S	D	I	S	I	S	V	S	E	L	G	S	L	L	D	H	S	G	P	H	K	E	A	E	Q	Y	I	A	R	V	F
Query Conservation																					.	.	.
Alig confidence																					.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.
Template Sequence		V	I	D	D	V	A	E	L	V	A	K	N	A	I	F	T	Q	H	P	D	C	I	A	H	L	H	T	P	P	L	X	P	A	V	A	A	E	A	X	I	A	A	L	N	Q	S	X	D	S	W	D	Q	A	S	S	.	.	.	.	.	.	.	.	.	A	T	Y	V	E	Q	K	V	V	N	W	L	C	D	K	Y
Template Known Secondary structure										T	G	G	G	S			T	T	S	T	T	B		S	S	S																						T	T		G	G	G				.	.	.	.	.	.	.	.	.																T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.										.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		209			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.																					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.
Predicted Secondary structure			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query SS confidence			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Query Sequence		N	.	.	A	D	R	S	Y	M	V	T	N	G	T	S	T	A	N	K	I	V	G	M	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	A	G	S	T	I	L	I	D	R	N	C	H	K	S	L	T	H	L	M	M	M	S	D	V	T	P	I	Y	F	R	P	.	T
Query Conservation			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Alig confidence			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		D	L	S	E	K	A	D	G	I	F	T	S	G	G	T	Q	S	N	Q	X	G	L	X	L	A	R	D	W	I	A	D	K	L	S	G	H	S	I	Q	K	L	G	L	P	D	Y	A	D	K	L	R	I	V	C	S	K	K	S	H	F	T	V	Q	K	S	A	S	W	X	G	L	G	E	K	A	V	X	T	V	D
Template Known Secondary structure		T			T	T							S	S																														S		T	T	G	G	G							T	T	S		T									T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																															.													.																		.	.
Query SS confidence																															.													.																		.	.
Query Sequence		R	N	A	Y	G	I	L	G	G	I	P	Q	S	E	F	Q	H	A	T	I	A	K	R	V	K	E	T	P	N	.	A	T	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	F	I	K	K	T	L	D	.	.	V	K	S	I	H	F	D	S	A	W	V	P	Y	T	N	F	S	P
Query Conservation																															.													.																		.	.
Alig confidence									.	.	.	.	.	.	.	.															.													.																		.	.
Template Conservation									.	.	.	.	.	.	.	.
Template Sequence		A	N	A	D	G	T	X	.	.	.	.	.	.	.	.	D	I	T	K	L	D	E	V	I	A	Q	A	K	A	E	G	L	I	P	F	A	I	V	G	T	A	G	T	T	D	H	G	A	I	D	D	L	D	F	I	A	D	X	A	V	K	H	D	X	W	X	H	V	D	G	A	Y	G	G	A	L	I	L	S	S
Template Known Secondary structure		B		T	T	S		B	.	.	.	.	.	.	.	.															T	T										B	S		T	T	T			B														T								T	T	G	G	G	G	G	G	S	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.
Template SS confidence
		695	.	.	.	.	700	.									.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	E	G	K	C	G	M	S	G	G	R	V	E	G	K	V	I	Y	E	T	Q	S	T	H	K	L	L	A	A	F	S	Q	A	S	M	I	H	V	K	G	D	V	N	E	E	T	F	N	E	A	Y	M	M	H	T	T	T	S	P	H	Y	G	I	V	A	S	T	E	T	A	A	A	M	M	K	G	N	A	G
Query Conservation
Alig confidence			.	.	.	.	.	.																																				.	.	.	.	.	.	.																					.	.	.	.
Template Conservation			.	.	.	.	.	.																																				.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		H	.	.	.	.	.	.	K	S	R	L	K	G	V	E	R	A	H	S	I	S	V	D	F	H	K	L	F	Y	Q	T	I	S	C	G	A	L	L	V	N	D	K	.	.	.	.	.	.	.	S	N	F	K	F	L	L	K	R	F	D	A	L	K	V	F	X	T	X	Q	.	.	.	.	N	V	G	P	K	A	L
Template Known Secondary structure		T	.	.	.	.	.	.	G	G	G	G	T	T	G	G	G		S						T	T	S	T	T				S	S							S		G	.	.	.	.	.	.	.	G	G	G	G	G	G					T										.	.	.	.		T
Template Predicted Secondary structure			.	.	.	.	.	.																																				.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		767							.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.								.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.					.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	I	N	G	S	I	E	R	A	I	K	F	R	K	E	I	K	R	L	R	T	E	S	D	G	W	F	F	D	V	W	Q	P	D	H	I	D	T	T	E	C	W	P	L	R	S	D	S	T	W	H	G	F	K	N	I	D	N	E	H	M	Y	L	D	P	I	K	V	T	L	L	T	P	G	M	E	K	D
Query Conservation
Alig confidence																									.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	X	Y	D	H	L	L	A	Q	T	L	E	V	A	D	X	I	R	T	N	D	Q	.	.	.	.	.	.	F	E	L	L	A	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	S	T	V	L	F	R	A	T	H	E	T	A	D
Template Known Secondary structure																					T		T	T	.	.	.	.	.	.					S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S									S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		854	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.							.	.	.	880	.	.	.																														.	.	.	.	.	.	890	.	.	.	.	.	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.				.	.	.	.	.	.	.	530	.	.	.	.			.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																							.	.	.													.	.
Query SS confidence																							.	.	.													.	.
Query Sequence		G	T	M	S	D	F	G	I	P	A	S	I	V	A	K	Y	L	D	E	H	G	.	.	.	I	V	V	E	K	T	G	P	Y	N	L	L	.	.	F	L	F	S	I	G	I	D	K	T	K	A	L	S	L	L	R	A	L	T	D	F	K	R	A	F
Query Conservation																							.	.	.													.	.
Alig confidence							.	.	.	.	.												.	.	.													.	.
Template Conservation							.	.	.	.	.
Template Sequence		L	D	E	L	N	.	.	.	.	.	K	A	L	R	L	E	A	L	T	R	G	I	A	V	L	G	E	T	I	V	D	G	K	T	A	L	K	F	T	I	L	N	P	C	L	T	T	S	D	F	E	S	L	L	S	K	I	N	X	L	A	V	E	L
Template Known Secondary structure							.	.	.	.	.											T	S		B							T	T											T	T
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		899	900	.	.	.						.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.