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Job DescriptionP0A9H3
Confidence99.81%DateThu Jan 5 11:10:12 GMT 2012
Rank53Aligned Residues304
% Identity12%Templatec2dr1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:386aa long hypothetical serine aminotransferase; PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   196...200.........210. ........220.........230.........240.........250..... ....260.........270.
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Query Sequence  PHKEAEQYIARVFNAD. . RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMS. . DVTPIYFRPTRNAYGI
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Template Sequence  VHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGK. . .
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   54.....60.........70.........80.........90.........100.........110.........120.........130
 
   272.......280.........290.........300.........310.........320...... ...330.........340.........
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Query Sequence  LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS. . IHFDSAWVPYTNFSPIYEGKCGM
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Template Sequence  . . . . . . . AVKPEDLDDALRKNPDVEAV. . TITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGG. . . . . . . . . . . A
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TT

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   131........140.........150 .........160.........170.........180......... 190
 
   350.........360.........370.........380. ........390.........400.........410...
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Query Sequence  SGGRVEGKVIYETQSTHKLLAAFSQASMIHVK. . . . . . . . . . . . . . . . GDVNEETFNEAYMMHTTTSPHYGIVASTETAA
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Template Sequence  DIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVAL
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   191........200.........210.........220.........230.........240.........250.........260.........270
 
   414.....420.........430.........440.........450.........460.........470.........480.........490...
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Query Sequence  AMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTL
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Template Sequence  RIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HESPTIT
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TT

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   271........280.........290.........300......... 310......
 
   494.....500.........510.........520....... ..530.........540.........550.........560....
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Query Sequence  LTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEK. . . . TGPYNLLFLFSIGIDKTKALSLLRALTDFKRAFDLNL
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Template Sequence  AV. . . . . . . . LTPPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKKQK
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GGGTTT

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   317. .320.........330.........340.........350.........360.........370.........380...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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