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Job DescriptionP0A9H3
Confidence99.63%DateThu Jan 5 11:10:12 GMT 2012
Rank117Aligned Residues314
% Identity13%Templatec1ynuA_
PDB info PDB header:lyaseChain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate synthase; PDBTitle: crystal structure of apple acc synthase in complex with l-vinylglycine
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210... ......220.........230.........240.........250..... ....260.........270.
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Query Sequence  KEAEQYIARVFNADRS. . . . . YMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMS. DVTPIYFRPTRNAYGI
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Template Sequence  KAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQ
Template Known Secondary structure  TTTSS


GGG

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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   272.......280.........290...... ...300...... ...310.... .....320.. .......330.........340....
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Query Sequence  LGGIPQSEFQHATIAKRVKETPNAT. WPVHAVITNS. TYDGLLYN. . . TDFIKKTL. . DVKSIHFDSAWVPYTNFSPIYE
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Template Sequence  I. . . . . . . . TETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI
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   173 ......180.........190.........200.........210.........220.........230.........240....
 
   345....350.........360.........370 .........380.........390.........400.........410.........420...
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Query Sequence  GKCGMSGGRVEGKVIYETQSTHKLLA. AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKR
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Template Sequence  SVMEVLKDSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNY. IAE
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   245....250.........260.........270.........280.........290.........300.........310.........320 ...
 
   424.....430.........440.........450.........460.........470.........480.........490.........500...
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Query Sequence  LINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGT
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Template Sequence  NHKRLKQRQKKLVSGLQK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SGISCLNGNAGLF. . . . CWVDMRHLLRSNT
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   330.........340....... ..350.........360 .........370...
 
   504.....510.........520...... ...530.........540.........550.........560
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Query Sequence  MSDFGIPASIVAKYLDEHGIVVE. . . . . . KTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF
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Template Sequence  FEA. . . EMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFA. NLPERTLDLAMQRLKAFVGEY
Template Known Secondary structure  ...TT

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   374.. ...380.........390.........400.........410. ........420.........430..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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