Job Description P0A9H3 Confidence 100.00% Date Thu Jan 5 11:10:12 GMT 2012 Rank 3 Aligned Residues 659 % Identity 32% Template c1c4kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein (ornithine decarboxylase); PDBTitle: ornithine decarboxylase mutant (gly121tyr) Resolution 2.70 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.														.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	I	E	N	N	A	R	L	C	G	V	I	F	D	W	D	K	Y	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	C	E	E	I	S	K	M	N	E	N	L	P	L	Y	A	F	A	N	T	Y	S	T	L	D	V	S	L	N	D	L	R	L	Q	I	S	F	F	E	Y	A	L	G	A	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																			.
Template Conservation																																																									.	.																			.
Template Sequence		Q	E	A	R	Q	Y	F	D	T	D	R	V	V	V	D	A	V	G	S	D	F	T	D	V	G	A	V	I	A	M	D	Y	E	T	D	V	I	D	A	A	D	A	T	K	F	G	I	P	V	F	A	V	T	K	D	.	.	A	Q	A	I	S	A	D	E	L	K	K	I	F	H	I	I	D	L	.	E	F	D	A
Template Known Secondary structure		G	G	G	G	G	G					S	S					S	S	S		S	S	S								T	T										T	T		S									S		.	.	S	T	T	S						T	T								.				S
Template Predicted Secondary structure																																																									.	.																			.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	I	A	N	K	I	K	Q	T	T	D	E	Y	I	N	T	I	L	P	P	L	T	K	A	L	F	K	Y	V	R	E	G	K	Y	T	F	C	T	P	G	H	M	G	G	T	A	F	Q	K	S	P	V	G	S	L	F	Y	D	F	F	G	P	N	T	M	K	S	D	I	S	I	S	V	S	E	L	G	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	N	A	R	E	I	E	T	A	V	N	N	Y	E	D	S	I	L	P	P	F	F	K	S	L	K	E	Y	V	S	R	Y	L	I	Q	F	D	C	P	G	H	Q	G	G	Q	Y	Y	R	K	H	P	A	G	R	E	F	Y	D	F	F	G	E	T	V	F	R	A	D	L	C	N	A	D	V	A	L	G	D	L
Template Known Secondary structure		T	T																	S												T	S						S	S	S	T	T	T	T	T	T	T	G	G	G	S												S					S				T	T	S	G	G	G		B	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		L	D	H	S	G	P	H	K	E	A	E	Q	Y	I	A	R	V	F	N	A	D	R	S	Y	M	V	T	N	G	T	S	T	A	N	K	I	V	G	M	Y	S	A	P	A	G	S	T	I	L	I	D	R	N	C	H	K	S	L	T	H	.	L	M	M	M	S	D	V	T	P	I	Y	F	R	P	T	R	N	A	Y
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		L	I	H	E	G	P	A	V	A	A	E	K	H	A	A	R	V	Y	N	A	D	K	T	Y	F	V	L	G	G	S	S	N	A	N	N	T	V	T	S	A	L	V	S	N	G	D	L	V	L	F	D	R	N	N	H	K	S	V	Y	N	S	A	L	A	M	A	G	G	R	P	V	Y	L	Q	T	N	R	N	P	Y
Template Known Secondary structure		T	T	T	B	T													T	T		S						S	S																T	T							T	T										T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.						.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																														.	.	.	.	.																											.	.
Query SS confidence																														.	.	.	.	.																											.	.
Query Sequence		G	I	L	G	G	I	P	Q	S	E	F	Q	H	A	T	I	A	K	R	V	K	E	T	P	N	A	T	W	.	.	.	.	.	P	V	H	A	V	I	T	N	S	T	Y	D	G	L	L	Y	N	T	D	F	I	K	K	T	L	D	.	.	V	K	S	I	H	F	D	S	A	W	V	P	Y	T	N	F	S	P	I
Query Conservation																														.	.	.	.	.																											.	.
Alig confidence																														.	.	.	.	.																											.	.
Template Conservation
Template Sequence		G	F	I	G	G	I	Y	D	S	D	F	D	E	K	K	I	R	E	L	A	A	K	V	D	P	E	R	A	K	W	K	R	P	F	R	L	A	V	I	Q	L	G	T	Y	D	G	T	I	Y	N	A	H	E	V	V	K	R	I	G	H	L	C	D	Y	I	E	F	D	S	A	W	V	G	Y	E	Q	F	I	P	M
Template Known Secondary structure									G	G	G	S									T	T	T	S	S					T		S			B	S						S	B		T	T	S													G	G	G	B	S							T	T			G	G	G	S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.					360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.									.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																			.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		Y	E	G	K	C	G	M	S	G	G	R	V	E	G	K	V	I	.	.	.	.	Y	E	T	Q	S	T	H	K	L	L	A	A	F	S	Q	A	S	M	I	H	V	K	G	D	.	.	.	.	.	.	.	.	V	N	E	E	T	F	N	E	A	Y	M	M	H	T	T	T	S	P	H	Y	G	I	V	A	S	T	E
Query Conservation																			.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence									.	.									.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation									.	.
Template Sequence		M	R	N	S	S	P	L	.	.	L	I	D	D	L	G	P	E	D	P	G	I	I	V	V	Q	S	V	H	K	Q	Q	A	G	F	S	Q	T	S	Q	I	H	K	K	D	S	H	I	K	G	Q	L	R	Y	C	D	H	K	H	F	N	N	S	F	N	L	F	M	S	T	S	P	F	Y	P	M	Y	A	A	L	D
Template Known Secondary structure		G	G	G	G		T	T	.	.	S						T	T	S													S	S			T	T									G	G	G	T	T	S	T	T															S		S	S
Template Predicted Secondary structure									.	.
Template SS confidence
		329	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.															.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	A	A	M	M	K	G	N	A	G	K	R	L	I	N	G	S	I	E	R	A	I	K	F	R	K	E	I	K	R	L	R	T	E	S	D	G	W	F	F	D	V	W	Q	P	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	T	T	E	C	W	P	L	R	S	D	S	T	W	H	G	F
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		V	N	A	A	M	Q	E	G	E	A	G	R	K	L	W	H	D	L	L	I	T	T	I	E	A	R	K	K	L	I	K	A	G	.	.	.	.	.	S	M	F	R	P	F	V	P	P	V	V	N	G	K	K	W	E	D	G	D	T	E	D	M	A	N	N	I	D	Y	W	R	F	E	K	G	A	K	W	H	A	Y
Template Known Secondary structure								S																									T	T	.	.	.	.	.		S	S			S	S		S			T	T			G	G	G	S						T	T		G	G	G	G	B			T	T		T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.						440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		K	N	I	D	N	E	H	M	Y	L	D	P	I	K	V	T	L	L	T	P	G	M	E	K	D	.	G	T	M	S	D	F	G	I	P	A	S	I	V	A	K	Y	L	D	E	H	G	I	V	V	E	K	T	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	L	S	L	L	R	A	L	T	D
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		E	G	Y	G	D	N	Q	Y	Y	V	D	P	N	K	F	M	L	T	T	P	G	I	N	P	E	T	G	D	Y	E	D	F	G	V	P	A	T	I	V	A	N	Y	L	R	D	H	G	I	I	P	E	K	S	D	L	N	S	I	L	F	L	M	T	P	A	E	T	P	A	K	M	N	N	L	I	T	Q	L	L	Q
Template Known Secondary structure		T	T			T	T						T	T							S	S			T	T	T	T				S	S														T	T				S				S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610			.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		F	K	R	A	F	D	L	N	L	R	V	K	N	M	L	P	S	L	Y	R	E	D	P	E	F	Y	E	N	M	R	I	Q	E	L	A	Q	N	I	H	K	L	I	V	H	H	N	L	P	D	L	M	Y	R	A	F	.	.	E	V	L	P	T	M	V	M	T	P	Y	A	A	F	Q	K	E	L	H	G	M	T	E
Query Conservation																																																									.	.
Alig confidence																																																									.	.
Template Conservation
Template Sequence		L	Q	R	L	I	E	E	D	A	P	L	K	Q	V	L	P	S	I	Y	A	A	N	E	E	R	Y	N	G	Y	T	I	R	E	L	C	Q	E	L	H	D	F	Y	K	N	N	N	T	F	T	Y	Q	K	R	L	F	L	R	E	F	F	P	E	Q	G	M	L	P	Y	E	A	R	Q	E	F	I	R	N	H	N	K
Template Known Secondary structure								T	T		B										T	T	S	T	T	T	S	T	T		B														T	T	T								T	T	S	G	G	G					S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.		710	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		E	V	Y	L	D	E	M	V	G	R	I	N	A	N	M	I	L	P	Y	P	P	G	V	P	L	V	M	P	G	E	M	I	T	E	E	S	R	P	V	L	E	F	L	Q	M	L	C	E	I	G	A	H	Y	P	G	F	E	T	D	I	H	G	A	Y	R	Q	A	D	G	R	Y	T	V	K	V	L	.	K	E	E
Query Conservation																																																																														.
Alig confidence																																					.	.	.																																							.
Template Conservation																																					.	.	.
Template Sequence		L	V	P	L	N	K	I	E	G	E	I	A	L	E	G	A	L	P	Y	P	P	G	V	F	C	V	A	P	G	E	K	W	S	E	T	.	.	.	A	V	K	Y	F	T	I	L	Q	D	G	I	N	N	F	P	G	F	A	P	E	I	Q	G	V	Y	F	K	Q	E	G	D	K	V	V	A	Y	G	E	V	Y	D
Template Known Secondary structure					T	T	T		T	T	S	B	B	S	S		B			T	T	T		S		S	B		T	T							.	.	.															S	T	T	S						S	S						T	T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.				.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
		713	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		719	720	.