Job Description P0ADN0 Confidence 97.79% Date Thu Jan 5 11:21:24 GMT 2012 Rank 34 Aligned Residues 101 % Identity 14% Template c3fcuB_ PDB info PDB header:cell adhesion/blood clotting Chain: B: PDB Molecule:integrin beta-3; PDBTitle: structure of headpiece of integrin aiibb3 in open conformation Resolution 2.90 Å

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		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.																														.	.
Predicted Secondary structure																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	I	V	C	V	D	T	S	G	S	M	G	G	F	N	E	Q	C	A	K	A	F	C	L	A	L	M	R	I	A	L	A	E	N	R	.	.	R	C	Y	I	M	L	F	S	T	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R
Query Conservation																																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		D	I	Y	Y	L	M	D	L	S	Y	S	M	K	D	D	.	L	W	S	I	Q	N	L	G	T	K	L	A	T	Q	M	R	K	L	T	S	N	L	R	I	G	F	G	A	F	V	D	K	P	V	S	P	Y	M	Y	I	S	P	P	E	A	L	E	N	P	C	Y	D	M	K	T	T	C	L	P	M	F	G	Y	K
Template Known Secondary structure										S	G	G	G	G	G	G	.																	T	T		S	S												S	S	T	T	T	S				S							T	T	G	G	G	T	S							S
Template Predicted Secondary structure																	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.					.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.				.	.	.	.	420	.	.
Predicted Secondary structure																		.										.	.	.	.																						.	.	.
Query SS confidence																		.										.	.	.	.																						.	.	.
Query Sequence		Y	E	L	S	G	P	Q	G	I	E	Q	A	I	R	F	L	.	S	Q	Q	F	R	G	G	T	D	.	.	.	.	L	A	S	C	F	R	A	I	M	E	R	L	Q	S	R	E	W	F	D	A	D	.	.	.	A	V	V	I	S	D	F
Query Conservation																		.										.	.	.	.																						.	.	.
Alig confidence																		.										.	.	.	.																						.	.	.
Template Conservation
Template Sequence		H	V	L	T	L	T	D	Q	V	T	R	F	N	E	E	V	K	K	Q	S	V	S	R	N	R	D	A	P	E	G	G	F	D	A	I	M	Q	A	T	V	C	D	E	K	I	G	W	R	N	D	A	S	H	L	L	V	F	T	T	D	A
Template Known Secondary structure								S											T							S	S	S	S	B																	T			S	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions