Job Description P0ADN0 Confidence 94.41% Date Thu Jan 5 11:21:24 GMT 2012 Rank 44 Aligned Residues 114 % Identity 17% Template c3eh2B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein transport protein sec24c; PDBTitle: crystal structure of the human copii-coat protein sec24c Resolution 2.35 Å

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		308	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.							.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																.												.																						.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query SS confidence																.												.																						.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query Sequence		P	V	V	H	K	D	Y	D	E	Q	P	R	G	P	.	F	I	V	C	V	D	T	S	G	S	M	.	G	G	F	N	E	Q	C	A	K	A	F	C	L	A	L	M	R	I	A	L	A	.	.	.	.	.	.	E	N	R	R	C	Y	I	M	L	F	S	T	E	I	V	R	Y	.	.	.	.	.	.	.	.	.
Query Conservation																.												.																						.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Alig confidence																.												.																						.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	D	Y	C	K	N	N	K	F	P	S	P	P	A	F	I	F	M	I	D	V	S	Y	N	A	I	R	T	G	L	V	R	L	L	C	E	E	L	K	S	L	L	D	F	L	P	R	E	G	G	A	E	E	S	A	I	R	V	G	F	V	T	Y	N	K	V	L	H	F	Y	N	Q	M	M	V	V	S	D	V
Template Known Secondary structure			G	G	G	S	G	G	G															S					T	T	T													G	G	G					T	T		S	S											S	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
													371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.								.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	E	L	S	G	P	Q	G	I	E	Q	A	I	R	F	L	S	Q	.	.	.	.	.	.	.	Q	F	R	G	G	T	D	L	A	S	C	F	R	A	I	M	E	R	L	Q	S	R	E	W	F	D	A	D	A	V	V	I	S	D	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.																									.
Template Conservation																																																													.
Template Sequence		A	D	M	F	V	P	L	L	D	G	F	L	V	N	V	N	E	S	R	A	V	I	T	S	L	L	D	Q	I	P	E	M	F	A	D	T	R	E	T	E	T	V	F	V	P	V	I	Q	A	G	M	E	A	L	K	A	A	E	C	.	A	G	K	L	F	L	F	H	T	S
Template Known Secondary structure		S	S							S	S	S	S	B		T	T	T	S																T	T								S															T		.										S
Template Predicted Secondary structure																																																													.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions