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Job Description | P0ADN0 | Confidence | 96.13% | Date | Thu Jan 5 11:21:24 GMT 2012 |
Rank | 38 | Aligned Residues | 104 |
% Identity | 15% | Template | c3eg9A_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:protein transport protein sec23a; |
PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin
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Resolution | 3.00 Å |
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322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | I | V | C | V | D | T | S | G | S | M | G | G | F | N | E | Q | C | A | K | A | F | C | L | A | L | M | R | I | A | L | A | E | N | R | R | C | Y | I | M | L | F | S | T | E | I | V | R | Y | E | L | S | G | P | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | L | Y | V | V | D | T | C | M | E | D | . |
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E | D | L | Q | A | L | K | E | S | M | Q | M | S | L | S | L | . |
L | P | P | T | A | L | V | G | L | I | T | F | G | R | M | V | Q | V | H | E | L | G | C | E | G | I | S | K | S | Y | V | F | R | G | T | K | D | L | S | A | K | Q | L | Q | E | M | L | G | L | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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131 | . | . | . | . | . | . | . | . | 140 | . | |
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376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | |
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410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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Q | G | I | E | Q | A | I | R | F | L | S | Q | Q | F | R | G | G | T | . |
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D | L | A | S | C | F | R | A | I | M | E | R | L | Q | S | R | . |
E | W | F | D | A | D | A | V | V | I | S | D | F | I | A | Q | R | L | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | V | S | N | R | F | L | Q | P | V | Q | K | I | D | M | N | L | T | D | L | L | G | E | L | Q | R | D | P | W | P | V | P | Q | G | K | R | P | L | R | S | S | G | V | A | L | S | I | A | V | G | L | L | E | C | T | F | P | N | T | G | A | R | I | M | M | F | I | G | G | P | A | T | Q | G | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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