Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADN0
Confidence96.13%DateThu Jan 5 11:21:24 GMT 2012
Rank38Aligned Residues104
% Identity15%Templatec3eg9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   322.......330.........340.........350.........360.........370.....
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Query Sequence  FIVCVDTSGSMGGFNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGP. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FLYVVDTCMED. . EDLQALKESMQMSLSL. LPPTALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGLS
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   131........140. ........150....... ..160.........170.........180.........190.........200.......
 
   376...380.........390... ......400......... 410.........420........
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Query Sequence  . . . . . . . . . . . . . . QGIEQAIRFLSQQFRGGT. . . . . . . DLASCFRAIMERLQSR. EWFDADAVVISDFIAQRLP
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Template Sequence  KVSNRFLQPVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGP
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   208.210.........220.........230.........240.........250.........260.........270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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