Job Description P0ADN0 Confidence 99.58% Date Thu Jan 5 11:21:24 GMT 2012 Rank 2 Aligned Residues 138 % Identity 10% Template c2x5nA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn10; PDBTitle: crystal structure of the sprpn10 vwa domain Resolution 1.30 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.
Predicted Secondary structure																.	.	.	.	.																.	.																																				.
Query SS confidence																.	.	.	.	.																.	.																																				.
Query Sequence		F	I	V	C	V	D	T	S	G	S	M	G	G	F	.	.	.	.	.	N	E	Q	C	A	K	A	F	C	L	A	L	M	R	I	.	.	A	L	A	E	N	R	R	C	Y	I	M	L	F	S	T	E	I	V	R	Y	E	L	S	G	P	Q	G	I	E	Q	A	I	R	F	L	.	S	Q	Q	F	R	G	G	T
Query Conservation																.	.	.	.	.																.	.																																				.
Alig confidence																.	.	.	.	.																.	.																																				.
Template Conservation
Template Sequence		T	M	I	L	I	D	N	S	E	W	M	I	N	G	D	Y	I	P	T	R	F	E	A	Q	K	D	T	V	H	M	I	F	N	Q	K	I	N	D	N	P	E	N	M	C	G	L	M	T	I	G	D	N	S	P	Q	V	L	S	T	L	T	R	D	Y	G	K	F	L	S	A	M	H	D	L	P	V	R	G	N	A
Template Known Secondary structure									S	G	G	G	G		T	T	S	S	S																						T	T										T	T	S									S										T	T					S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		D	L	A	S	C	F	R	A	I	M	E	R	L	Q	S	R	E	W	F	D	A	D	.	.	A	V	V	I	S	D	F	I	A	Q	R	L	P	D	D	V	T	S	K	V	K	E	L	Q	R	V	H	Q	H	R	F	H	A	V	A	M	S	A	H	G	K	P	G	I	M
Query Conservation																								.	.
Alig confidence																								.	.																										.
Template Conservation																																																			.
Template Sequence		K	F	G	D	G	I	Q	I	A	Q	L	A	L	K	H	R	E	N	K	I	Q	R	Q	R	I	V	A	F	V	G	S	P	I	V	E	D	E	K	N	L	I	R	L	A	K	R	M	K	K	.	N	N	V	A	I	D	I	I	H	I	G	E	L	S	A	L	Q	H	F
Template Known Secondary structure																T		S		T	T	S										S			S	S															.	T	T									S
Template Predicted Secondary structure																																																			.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions