Job Description P0ADN0 Confidence 99.16% Date Thu Jan 5 11:21:24 GMT 2012 Rank 18 Aligned Residues 133 % Identity 11% Template c2b2xB_ PDB info PDB header:immune system Chain: B: PDB Molecule:integrin alpha-1; PDBTitle: vla1 rdeltah i-domain complexed with a quadruple mutant of the aqc22 fab Resolution 2.20 Å

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		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.																.
Query SS confidence																																																				.																.
Query Sequence		P	F	I	V	C	V	D	T	S	G	S	M	G	G	F	N	E	Q	C	A	K	A	F	C	L	A	L	M	R	I	A	L	A	E	N	R	R	C	Y	I	M	L	F	S	T	E	I	V	R	Y	.	E	L	S	G	P	Q	G	I	E	Q	A	I	R	F	L	.	S	Q	Q	F	R	G	G	T	D	L	A	S	C
Query Conservation																																																				.																.
Alig confidence															.	.																.																				.																.
Template Conservation															.	.																.
Template Sequence		D	I	V	I	V	L	D	G	S	N	S	I	Y	.	.	P	W	E	S	V	I	A	F	L	N	D	L	L	K	R	.	G	P	K	Q	T	Q	V	G	I	V	Q	Y	G	E	N	V	T	H	E	F	N	L	N	K	Y	S	E	E	V	L	V	A	A	N	K	I	V	Q	R	G	G	R	Q	T	M	T	A	L	G
Template Known Secondary structure										S	T	T			.	.													T	T		.		T	T	S									S	S	S							T	T	S										T	T							S	S
Template Predicted Secondary structure															.	.																.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		F	R	A	I	M	E	R	L	Q	S	R	E	.	W	F	D	A	D	A	V	V	I	S	D	F	I	A	Q	R	L	P	D	D	V	T	S	K	V	K	E	L	Q	R	V	H	Q	H	R	F	H	A	V	A	M	S	A	H	G	K	P	G
Query Conservation														.
Alig confidence														.														.																	.
Template Conservation																												.																	.
Template Sequence		I	D	T	A	R	K	E	A	F	T	E	A	R	G	A	R	K	V	M	V	I	V	T	D	G	E	.	S	H	D	N	Y	R	L	K	Q	V	I	Q	D	C	E	D	.	E	N	I	Q	R	F	S	I	A	I	L	G	H	Y	S	T	E
Template Known Secondary structure							T	T	T	S	S	G	G	G	T										S	S		.		T	T	G	G	G											.	T	T										T	T
Template Predicted Secondary structure																												.																	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions