Job Description P0ADN0 Confidence 96.76% Date Thu Jan 5 11:21:24 GMT 2012 Rank 36 Aligned Residues 126 % Identity 17% Template c1u8cB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: a novel adaptation of the integrin psi domain revealed from its2 crystal structure Resolution 3.10 Å

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		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.																														.	.	.
Predicted Secondary structure																							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	I	V	C	V	D	T	S	G	S	M	G	G	F	N	E	Q	C	A	K	.	.	.	A	F	C	L	A	L	M	R	I	A	L	A	E	N	R	R	C	Y	I	M	L	F	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	V
Query Conservation																							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.									.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		D	I	Y	Y	L	M	D	L	S	Y	S	M	K	D	D	L	W	S	I	Q	N	L	G	T	K	L	A	T	Q	M	R	K	.	.	L	T	S	N	L	R	I	G	F	G	A	F	V	D	K	P	V	S	P	Y	M	Y	I	S	P	P	E	A	L	E	N	P	C	Y	D	M	K	T	T	C	L	P	M	F	G	Y
Template Known Secondary structure										B	G	G	G	T	T	T	T	S	T	T	T	S	T	T	T								T	.	.	T		S														S	T	T	T	T	T		S	S	S	G	G	G	S	S	S		T	T	T	S	S							S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		1113	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.			.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.					.	.	.	410	.	.	.	.	.				.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																			.																						.	.	.	.										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																						.	.	.	.										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Y	E	L	S	G	P	Q	G	I	E	Q	A	I	R	F	L	.	S	Q	Q	F	R	G	G	T	D	L	A	S	C	F	R	A	I	M	E	R	L	.	.	.	.	Q	S	R	E	W	F	D	A	D	.	.	.	A	V	V	I	S	D	F	I	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																						.	.	.	.										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																						.	.	.	.										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	H	V	L	T	L	T	D	Q	V	T	R	F	N	E	E	V	K	K	Q	S	V	S	R	N	R	D	A	P	E	G	G	F	D	A	I	M	Q	A	T	V	C	D	E	K	I	G	W	R	N	D	A	S	H	L	L	V	F	T	T	D	A	K	T	H	I	A	L	D	G	R	L	A	G	I	V	Q	P	N	D
Template Known Secondary structure							S	B	S		T	T	T	T					T	T				B			S	S	S	S	B													T	T	T	T				T	T	S									S	S		B			T	T	G	G	G	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		1191	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270
																			426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	P	D	D	V	T	S	K	V	K	E	L	Q	R	V	H	Q	H	R	F	H	A	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																						.
Template Sequence		G	Q	C	H	V	G	S	D	N	H	Y	S	A	S	T	T	M	D	Y	P	.	S	L	G	L	M	T	E	K	L	S	Q	K	N	I	N	L	I	F	A	V
Template Known Secondary structure								T	T		B		T	T	T	T	T	S				.												T	T
Template Predicted Secondary structure																						.
Template SS confidence
		1271	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290		.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions