Job Description P0ADN0 Confidence 96.82% Date Thu Jan 5 11:21:24 GMT 2012 Rank 35 Aligned Residues 132 % Identity 17% Template c1m2oA_ PDB info PDB header:protein transport/signaling protein Chain: A: PDB Molecule:protein transport protein sec23; PDBTitle: crystal structure of the sec23-sar1 complex Resolution 2.50 Å

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		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		R	L	H	G	E	S	W	R	E	K	V	I	E	R	P	V	V	H	K	D	Y	D	E	Q	P	R	G	P	F	.	I	V	C	V	D	T	S	G	S	M	G	G	F	N	E	Q	C	A	K	A	F	C	L	A	L	M	R	I	A	L	A	E	N	R	R	C	Y	I	M	L	F	S	T	E	I	V	R	Y	E	L
Query Conservation																															.
Alig confidence																															.											.	.																	.
Template Conservation																																										.	.																	.
Template Sequence		Q	Y	T	N	E	N	M	P	L	E	L	Q	S	T	T	I	E	Y	I	T	N	K	P	V	T	V	P	P	I	F	F	F	V	V	D	L	T	S	E	T	.	.	E	N	L	D	S	L	K	E	S	I	I	T	S	L	S	L	.	L	P	P	N	A	L	I	G	L	I	T	Y	G	N	V	V	Q	L	H	D	L
Template Known Secondary structure		G	G							G	G	G	T		S							S					S												S			.	.																T	.	S		T	T									S	S
Template Predicted Secondary structure																																										.	.																	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		373	.	.																																															.	.	.	.	380	.	.	.	.	.								.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Query Sequence		S	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	I	E	Q	A	I	R	F	L	.	.	.	.	.	.	.	S	Q	Q	F	R	G	G	T	D	L	A	S	C	F
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	E	T	I	D	R	C	N	V	F	R	G	D	R	E	Y	Q	L	E	A	L	T	E	M	L	T	G	Q	K	P	T	V	T	P	F	S	L	N	R	F	F	L	P	L	E	Q	V	E	F	K	L	N	Q	L	L	E	N	L	S	P	D	Q	W	S	V	P	A	G	H	R	P	L	R	A	T	G	S	A	L
Template Known Secondary structure		S	S	S	S	S								T	T	S													S							S	S	S	G	G	G	G	S																T				S		S				T	T	B
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		R	A	I	M	E	R	L	Q	S	R	.	E	W	F	D	A	D	A	V	V	I	S	D	F	I	A	Q	R	L	P
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		N	I	A	S	L	L	L	Q	G	C	Y	K	N	I	P	A	R	I	I	L	F	A	S	G	P	G	T	V	A	P
Template Known Secondary structure													T	T	S									S	S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions