Return to main results Retrieve Phyre Job Id

Job DescriptionP68679
Confidence9.16%DateThu Jan 5 12:11:07 GMT 2012
Rank33Aligned Residues21
% Identity14%Templatec2jobA_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:antilipopolysaccharide factor; PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.
Predicted Secondary structure 
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Query Sequence  PFDVALRRFKRSCEKAGVLAE
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Template Sequence  VAGKTAKDFVRKAFQKGLISQ
Template Known Secondary structure  T
S
Template Predicted Secondary structure 



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   73......80.........90...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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