Job Description P75967 Confidence 95.60% Date Thu Jan 5 12:16:34 GMT 2012 Rank 100 Aligned Residues 169 % Identity 16% Template d1p91a_ SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases rRNA methyltransferase RlmA Resolution 2.80

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		R	Y	L	C	E	Y	I	R	S	I	E	K	N	G	H	A	.	.	L	D	F	G	C	G	K	L	R	Y	S	D	E	L	I	S	K	F	D	E	V	T	F	L	D	S	K	R	Q	L	E	R	E	Q	I	I	R	G	I	K	T	K	I	I	D	Y	V	P	R	Y	Y	K	N	A	N	T	V	A	F	E	D	V
Query Conservation																		.	.
Alig confidence																		.	.																																																		.	.	.	.									.
Template Conservation																																																																					.	.	.	.									.
Template Sequence		D	A	I	V	A	Q	L	R	E	R	L	D	D	K	A	T	A	V	L	D	I	G	C	G	E	G	Y	Y	T	H	A	F	A	D	A	L	P	E	I	T	T	F	G	L	D	V	S	K	V	A	I	K	A	A	A	K	R	Y	P	Q	V	T	F	C	V	A	S	.	.	.	.	S	H	R	L	P	F	S	D	.
Template Known Secondary structure												S		T	T								T		T	T	S	T	T							T		T	T	S							S													T	T	S							.	.	.	.	T	T	S		S	B		T	.
Template Predicted Secondary structure																																																																					.	.	.	.									.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	I	I	G	G	Y	D	F	I	L	C	S	N	V	L	S	A	V	P	C	R	D	T	I	D	K	I	V	L	S	I	K	R	L	L	K	S	G	G	E	T	L	I	V	N	Q	Y	K	S	S	Y	F	K	K	Y	E	.	.	.	.	.	.	.	.	.	.	T	G	R	K	H	L	Y	G	Y	I	Y	K	N
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																		.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	T	S	X	D	A	I	I	R	I	Y	A	P	C	K	A	E	E	.	.	.	.	.	.	.	.	.	.	L	A	R	V	V	K	P	G	G	W	V	I	T	A	T	P	G	P	R	H	L	X	E	L	K	G	L	I	Y	N	E	V	H	L	H	A	P	H	A	E	Q	L	E	G	F	T	L	Q	Q
Template Known Secondary structure		.	.	.	.	T									S								.	.	.	.	.	.	.	.	.	.																		T	T	T	T					T	T	T		S	S												T	T
Template Predicted Secondary structure		.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
						147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		S	K	S	V	S	Y	Y	G	L	L	D	E	L	A	V	Q	E	I	C	S	S	H	G	L	.	.	.	.	.	.	E	I	L	K	S	W	S	K	A	G	S	S	Y	V	T	V
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	E	L	C	Y	P	X	R	L	R	G	D	E	A	V	A	L	L	Q	X	T	P	F	A	W	R	A	K	P	E	V	W	Q	T	L	A	A	K	E	V	F	D	C	Q	T
Template Known Secondary structure																						T	S	T	T	G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions