Job Description P75967 Confidence 96.34% Date Thu Jan 5 12:16:34 GMT 2012 Rank 90 Aligned Residues 152 % Identity 20% Template c3opnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hemolysin; PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																								.
Query SS confidence														.	.	.	.	.	.																								.
Query Sequence		S	R	Y	L	C	E	Y	I	R	S	I	E	.	.	.	.	.	.	K	N	G	H	A	L	D	F	G	C	G	K	L	R	Y	S	D	E	L	I	S	K	F	.	D	E	V	T	F	L	D	S	K	R	Q	L	E	R	E	Q	I	I	R	G	I	K	T	K	I	I	D	Y	V	P	R	Y	Y	K	N	A	N	T
Query Conservation														.	.	.	.	.	.																								.
Alig confidence														.	.	.	.	.	.																								.											.	.	.	.	.																	.	.
Template Conservation																																																						.	.	.	.	.																	.	.
Template Sequence		S	R	G	G	L	K	L	E	K	A	L	K	E	F	H	L	E	I	N	G	K	T	C	L	D	I	G	S	S	T	G	G	F	T	D	V	X	L	Q	N	G	A	K	L	V	Y	A	L	D	V	G	T	.	.	.	.	.	N	Q	L	A	W	K	I	R	S	D	E	R	V	V	V	X	.	.	E	Q	F	N	F
Template Known Secondary structure		S	T	T											T	T				T	T							T		T	T	S									T	T		S							S	S		.	.	.	.	.									T		T	T					.	.		S			G
Template Predicted Secondary structure																																																						.	.	.	.	.																	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	E	D	V	D	K	I	I	G	G	Y	D	F	I	L	C	S	N	V	L	S	A	V	P	C	R	D	T	I	D	K	I	V	L	S	I	K	R	L	L	K	S	G	G	E	T	L	I	V	N	Q	Y	K	S	S	Y	F	K	K	Y	E	T	G	R	K	H	L	Y	G	Y	I	Y	K	N	S	K	S	V
Query Conservation
Alig confidence																												.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		R	N	A	V	L	A	D	F	E	Q	G	R	P	S	F	T	S	I	D	V	S	F	I	S	L	D	.	.	.	.	.	.	L	I	L	P	P	L	Y	E	I	L	E	K	N	G	E	V	A	A	L	I	K	.	.	.	.	.	.	P	Q	F	E	A	G	R	E	Q	V	G	N	G	I	I	R	D	P	K	V	H
Template Known Secondary structure		G	G			G	G	G			S				S							S	S	S		G	G	.	.	.	.	.	.	G	T								S		T	T									.	.	.	.	.	.					S
Template Predicted Secondary structure																												.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	Y	G	L	L	D	E	L	A	V	Q	E	I	C	S	S	H	G	L	E	I
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		Q	X	T	.	.	.	.	I	E	K	V	L	K	T	A	T	Q	L	G	F	S	V
Template Known Secondary structure					.	.	.	.												T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions