Job Description P75967 Confidence 97.36% Date Thu Jan 5 12:16:34 GMT 2012 Rank 58 Aligned Residues 179 % Identity 12% Template c3ocjA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis Resolution 1.39 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		S	R	Y	L	C	E	Y	I	R	S	I	E	K	N	G	H	A	L	D	F	G	C	G	K	L	R	Y	S	D	E	L	I	S	K	F	D	.	.	.	E	V	T	F	L	D	S	K	R	Q	L	E	R	E	Q	I	I	R	G	I	K	T	K	I	I	D	Y	V	P	R	Y	Y	K	N	A	N	T	V	A	F	E
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.							.	.	.	.																			.	.	.	.	.	.
Template Conservation																																															.	.	.	.																			.	.	.	.	.	.
Template Sequence		G	H	F	R	R	A	L	Q	R	H	L	R	P	G	C	V	V	A	S	V	P	C	G	W	X	S	E	L	L	A	L	D	Y	S	A	C	P	G	V	Q	L	V	G	I	D	.	.	.	.	Y	D	P	E	A	L	D	G	A	T	R	L	A	A	G	H	A	L	.	.	.	.	.	.	A	G	Q	I	T	L	H
Template Known Secondary structure														T	T						T	T		T	T						T	S			T	T		T	T								.	.	.	.	S													T	T	S	T	T	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																															.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.
		104	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.									.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure							.	.	.	.																																															.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.																																															.	.	.	.	.	.	.	.
Query Sequence		D	V	D	K	I	.	.	.	.	I	G	G	Y	D	F	I	L	C	S	N	V	L	S	A	V	P	C	R	D	T	I	D	K	I	V	L	S	I	K	R	L	L	K	S	G	G	E	T	L	I	V	N	Q	Y	K	.	.	.	.	.	.	.	.	S	S	Y	F	K	K	Y	E	T	G	R	K	H	L	Y	G	Y
Query Conservation							.	.	.	.																																															.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	D	A	W	K	L	D	T	R	E	G	Y	D	L	L	T	S	N	G	L	N	I	Y	E	P	D	D	A	R	V	T	E	L	Y	R	R	F	W	Q	A	L	K	P	G	G	A	L	V	T	S	F	L	T	P	P	P	A	L	S	P	D	S	P	W	D	X	Q	A	I	D	P	H	D	L	Q	L	Q	Q	L
Template Known Secondary structure					G	G	G					S									S	S	G	G	G																																	T	T	T		T	T					G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	N	S	K	S	V	S	Y	Y	G	L	L	D	E	L	A	V	Q	E	I	C	S	S	H	G	L	E	I	L	K	S	W	S	K	A	G	S	S	Y	V	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	T	R	L	I	Q	P	R	W	N	A	L	R	T	H	A	Q	T	R	A	Q	L	E	E	A	G	F	T	D	L	R	F	E	D	D	R	A	R	L	F	P	T	V
Template Known Secondary structure						T	T			S																	T	T										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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