Job Description P75967 Confidence 74.69% Date Thu Jan 5 12:16:34 GMT 2012 Rank 163 Aligned Residues 128 % Identity 20% Template c3c6kC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermine synthase; PDBTitle: crystal structure of human spermine synthase in complex2 with spermidine and 5-methylthioadenosine Resolution 1.95 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																						.	.	.	.	.	.	.											.	.	.	.	.	.
Query SS confidence																					.																																						.	.	.	.	.	.	.											.	.	.	.	.	.
Query Sequence		L	D	F	G	C	G	K	L	R	Y	S	D	E	L	I	S	K	F	D	.	E	V	T	F	L	D	S	K	R	Q	L	E	R	E	Q	I	I	R	G	I	K	T	K	I	I	D	Y	V	P	R	Y	Y	K	N	A	N	T	.	.	.	.	.	.	.	V	A	F	E	D	V	D	K	I	I	.	.	.	.	.	.
Query Conservation																					.																																						.	.	.	.	.	.	.											.	.	.	.	.	.
Alig confidence																					.							.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	L	G	G	G	D	G	G	I	L	C	E	I	V	K	L	K	P	K	M	V	T	M	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	Q	M	V	I	D	G	C	K	K	Y	M	R	K	L	D	N	L	K	G	D	C	Y	Q	V	L	I	E	D	C	I	P	V	L	K	R	Y	A	K	E
Template Known Secondary structure							T	T									T	T			S							.	.	.	.	.	.	.	.	.	.	.	.	.	S																	S	S	B		S	S						S												T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.														.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
			110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.													.	.	.												.
Query SS confidence		.													.	.	.												.
Query Sequence		.	G	G	Y	D	F	I	L	C	S	N	V	L	.	.	.	S	A	V	P	C	R	D	T	I	D	K	.	I	V	L	S	I	K	R	L	L	K	S	G	G	E	T	L	I	V	N	Q	Y	K	S	S	Y	F	K	K	Y	E	T	G	R	K	H	L	Y	G	Y	I	Y	K	N	S	K	S	V	S	Y	Y	G	L
Query Conservation		.													.	.	.												.
Alig confidence		.													.	.	.												.														.	.
Template Conservation																																											.	.
Template Sequence		G	R	E	F	D	Y	V	I	N	D	L	T	A	V	P	I	S	T	S	P	S	T	W	E	F	L	R	L	I	L	D	L	S	M	K	V	L	K	Q	D	G	.	.	K	Y	F	T	Q	G	N	C	V	N	L	T	E	A	L	S	L	Y	E	E	Q	L	G	R	L	Y	C	P	V	E	F	S	K	E	I	V	C
Template Known Secondary structure		T												S	S																						T						.	.									T	T													T	S	S	S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		185	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P
Template Known Secondary structure			G
Template Predicted Secondary structure
Template SS confidence
		350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions