|   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | M | P | S | R | Y | L | C | E | Y | I | R | S | I | . |
. |
. |
E | K | N | G | H | A | L | D | F | G | C | G | K | L | R | Y | S | D | E | L | I | S | K | F | D | E | V | T | F | L | D | S | . |
K | R | Q | L | E | R | E | Q | I | I | R | G | I | K | T | K | I | I | D | Y | V | P | R | Y | Y | K | N | A | N | T |
Query Conservation |   |
|   |   |
|   |
|
|   |   |   |
|   |   |
| . | . | . |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|
|
|   |   |
|
|
| . |   |   |
|
|   |
|   |
|
|
|
|
|   |   |
|   |
|   |
|
|
|   |   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |
Template Sequence |   |
S | P | X | X | A | N | P | A | Q | L | I | A | Q | L | V | N | E | I | E | P | L | K | V | L | D | I | S | A | S | H | G | L | F | G | I | A | V | A | Q | H | N | P | N | A | E | I | F | G | V | D | W | A | S | V | L | E | V | A | K | E | N | A | R | I | Q | G | V | A | S | R | Y | . |
. |
. |
. |
. |
. |
H | T | I |
Template Known Secondary structure |   |
G | G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| S |  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G |  | . | . | . | . | . | . |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
|
|
|
. | . | . |
  |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | F | E | D | V | D | K | I | I | G | G | Y | D | F | I | L | C | S | N | V | L | S | A | V | P | C | R | D | T | I | D | K | I | V | L | S | I | K | R | L | L | K | S | G | G | E | T | L | I | V | N | Q | Y | K | S | S | Y | F | K | K | Y | E | T | G | R | K | H | L | Y | G | Y | I | Y | K | N | S | K | S | V |
Query Conservation |   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . |   |   |   |   |
|   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
A | G | S | A | F | E | V | D | Y | G | N | D | Y | D | L | V | L | L | P | N | F | L | H | H | F | D | V | A | T | C | E | Q | L | L | R | K | . |
I | K | T | A | L | A | V | E | G | K | V | I | V | F | D | F | I | P | N | S | D | R | I | T | P | P | D | A | A | A | F | S | L | V | X | L | A | T | T | P | N | G | D |
Template Known Secondary structure |   |
 | S |
| T | T | T | S |
|
|
| S |
|  |  |  |  |  |  |  | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| T | T | S | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
  |
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Y | Y | G | L | L | D | E | L | A | V | Q | E | I | C | S | S | H | G | L | E | I | L | K | S | W | S | K | A | G | S | S | Y | V | T | V |
Query Conservation |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . | . |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|
Template Sequence |   |
A | Y | . |
. |
. |
. |
T | F | A | E | Y | E | S | X | F | S | N | A | G | F | S | H | S | Q | L | H | S | L | P | T | T | Q | Q | Q | V | I |
Template Known Secondary structure |   |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
| T | T | S | S | S |  |  |  |
Template Predicted Secondary structure |   |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
299 | 300 | |
|
|
|
. | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
  |