Job Description P75967 Confidence 95.80% Date Thu Jan 5 12:16:34 GMT 2012 Rank 96 Aligned Residues 113 % Identity 24% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		S	R	Y	L	C	E	Y	I	R	S	I	E	K	N	G	H	A	L	D	F	G	C	G	K	L	R	Y	S	D	E	L	I	S	K	F	.	.	D	E	V	T	F	L	D	S	K	R	Q	L	E	R	E	Q	I	I	R	G	I	K	T	K	I	I	D	Y	V	P	R	Y	Y	K	N	A	N	T	V	A	F	E	D
Query Conservation																																					.	.
Alig confidence												.																									.	.								.	.	.	.																			.	.	.	.	.	.
Template Conservation												.																																		.	.	.	.																			.	.	.	.	.	.
Template Sequence		S	Q	L	L	L	S	T	L	T	P	.	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	.	.	.	.	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	.	.	.	.	.	E	G	E	V	F	A	S	N
Template Known Secondary structure									S		T	.	T			S	B			B	T	T		T	T	S											T	T		B						.	.	.	.	S	B														T	T		.	.	.	.	.	.								S
Template Predicted Secondary structure												.																																		.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.							.	.	.	.	250	.	.	.
		105	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure									.															.	.
Query SS confidence									.															.	.
Query Sequence		V	D	K	I	I	G	G	.	Y	D	F	I	L	C	S	N	V	L	S	A	V	P	.	.	C	R	D	T	I	D	K	I	V	L	S	I	K	R	L	L	K	S	G	G	E	T	L	I	V
Query Conservation									.															.	.
Alig confidence									.															.	.
Template Conservation
Template Sequence		V	F	S	E	V	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V
Template Known Secondary structure		T	T	T	T			S													S	S	S															G	G	G
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions