 |
Job Description | Q46864 | Confidence | 67.22% | Date | Thu Jan 5 12:35:21 GMT 2012 |
Rank | 220 | Aligned Residues | 34 |
% Identity | 9% | Template | d1a04a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| C-terminal effector domain of the bipartite response regulators
| GerE-like (LuxR/UhpA family of transcriptional regulators)
|
Resolution | 2.20 |
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | P | E | F | I | V | K | V | R | K | K | . |
L | S | L | T | Q | K | E | A | S | E | I | F | G | G | G | V | N | A | F | S | R | Y |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|   |   | . |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |
Template Sequence |   |
L | T | P | R | E | R | D | I | L | K | L | I | A | Q | G | L | P | N | K | M | I | A | R | R | L | D | I | T | E | S | T | V | K | V | H |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|