 |
Job Description | Q46864 | Confidence | 31.93% | Date | Thu Jan 5 12:35:21 GMT 2012 |
Rank | 470 | Aligned Residues | 62 |
% Identity | 13% | Template | c3ztgA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rbbp6; |
PDBTitle: solution structure of the ring finger-like domain of2 retinoblastoma binding protein-6 (rbbp6)
|
Resolution | UNK |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | C | P | V | C | H | Q | G | E | M | V | S | G | I | K | D | I | P | Y | T | F | R | G | R | K | T | V | L | K | G | I | H | G | L | Y | . |
. |
. |
. |
. |
. |
. |
C | V | H | C | E | E | S | I | M | N | K | E | E | S | . |
. |
D | A | F | M | A | Q | V | K | A | F | R | A | S | V | N | A |
Query Conservation |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |
|
|
|   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |   | . | . | . | . |   |   |   |   |
|
|   |   |   |   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
L | L | C | L | I | C | K | D | . |
. |
. |
. |
I | M | T | D | A | V | V | I | P | C | C | G | N | S | Y | C | D | E | C | I | R | T | A | L | L | E | S | D | E | H | T | C | P | T | C | H | Q | N | D | V | S | P | D | A | L | I | A | N | K | F | L | R | Q | A | V | N | N | F | K | N | E | T | G |
Template Known Secondary structure |   |
T |  |  | T | T | T | T |  | . | . | . | . |  |
| S | S |
|  |  |
| T | T | T |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|
| T | T | T |
|
| S | S |
|
| T | T | S |
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |
|
| . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
257 | . | . | 260 | . | . | . | . | |
|
|
|
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|