Return to main results Retrieve Phyre Job Id

Job DescriptionQ46864
Confidence99.05%DateThu Jan 5 12:35:21 GMT 2012
Rank10Aligned Residues59
% Identity20%Templatec3lisB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:csp231i c protein; PDBTitle: crystal structure of the restriction-modification controller protein2 c.csp231i (monoclinic form)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90...... ...100.........110 .........120.......
Predicted Secondary structure 








....






.



Query SS confidence 



























. . . .













.
















Query Sequence  VAPEFIVKVRKKLSLTQKEASEIFGGGV. . . . NAFSRYEKGNAQPH. PSTIKLLRVLDKHPELL
Query Conservation       

 

   



  

  

   .... 



 
 
   
 .     
   
   

 
Alig confidence 



























....













.
















Template Conservation      


  
   



 


  


    
 
 

  
 
   

   
  

  
 
    
Template Sequence  MLIRRLKDARLRAGISQEKLGVLAGIDEASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYL
Template Known Secondary structure 

T

TT

TSS


TTS
GGGG
Template Predicted Secondary structure 















Template SS confidence 































































   1........10.........20.........30.........40.........50.........60....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions