Job Description Q46864 Confidence 95.58% Date Thu Jan 5 12:35:21 GMT 2012 Rank 62 Aligned Residues 50 % Identity 24% Template c3l1pA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:pou domain, class 5, transcription factor 1; PDBTitle: pou protein:dna complex Resolution 2.80 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		A	P	E	F	I	V	K	V	R	K	K	L	S	L	T	Q	K	E	A	S	E	I	F	G	.	.	.	.	.	.	G	G	V	N	A	F	S	R	Y	E	K	G	N	A	Q	P	H	P	S	T	I	K	L	L	R	V	L
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.													.
Template Conservation																																												.
Template Sequence		F	A	K	L	L	K	Q	K	R	I	T	L	G	Y	T	Q	A	D	V	G	L	T	L	G	V	L	F	G	K	V	F	S	Q	T	T	I	S	R	F	E	A	L	.	Q	L	S	L	K	N	M	S	K	L	R	P	L	L
Template Known Secondary structure													T	T															S													T	T	.		S
Template Predicted Secondary structure																																												.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions