 |
Job Description | Q46864 | Confidence | 47.88% | Date | Thu Jan 5 12:35:21 GMT 2012 |
Rank | 332 | Aligned Residues | 61 |
% Identity | 13% | Template | c3htkC_ |
PDB info |
PDB header:recombination/replication/ligase | Chain: C: PDB Molecule:e3 sumo-protein ligase mms21; |
PDBTitle: crystal structure of mms21 and smc5 complex
|
Resolution | 2.31 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
| . | . |
|
|  |  |  |  |
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | C | P | V | C | H | Q | G | E | M | V | S | G | I | K | D | I | P | Y | T | F | R | G | R | K | T | V | L | K | G | I | H | G | L | Y | . |
. |
. |
. |
. |
. |
. |
C | V | H | . |
. |
C | E | E | S | I | M | N | K | E | E | . |
. |
S | D | A | F | M | A | Q | V | K | A | F | R | A | S | V | N |
Query Conservation |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   | . | . |
|
|
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   | . | . | . | . |   |
|   |
|
|
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
L | T | C | P | I | T | C | K | . |
. |
. |
. |
P | Y | E | A | P | L | I | S | R | K | C | N | H | V | F | D | R | D | G | I | Q | N | Y | L | Q | G | Y | T | T | R | D | C | P | Q | A | A | C | S | Q | V | V | S | M | R | D | F | V | R | D | P | I | M | E | L | R | C | K | I | A | K | M | K | E | S |
Template Known Secondary structure |   |
S | B |
| T | T | T | S | S | . | . | . | . | B |
| S | S |  |  |  |  | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  | S | T | T |
| S |
|  |  |
| S | G | G | G |
| S |
|  |  |
| G | G | G |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  | . | . | . | . |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
182 | . | . | . | . | . | . | . | |
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|