Job Description Q46864 Confidence 94.51% Date Thu Jan 5 12:35:21 GMT 2012 Rank 69 Aligned Residues 52 % Identity 33% Template c3d1nK_ PDB info PDB header:transcription regulator/dna Chain: K: PDB Molecule:pou domain, class 6, transcription factor 1; PDBTitle: structure of human brn-5 transcription factor in complex2 with corticotrophin-releasing hormone gene promoter Resolution 2.51 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		A	P	E	F	I	V	K	V	R	K	K	L	S	L	T	Q	K	E	A	S	E	I	F	G	.	.	.	.	.	.	G	G	V	N	A	F	S	R	Y	E	K	G	N	A	Q	P	H	P	S	T	I	K	L	L	R	V	L	D	K
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.													.
Template Conservation																																												.
Template Sequence		F	A	K	N	F	K	I	R	R	L	S	L	G	L	T	Q	T	Q	V	G	Q	A	X	T	A	T	E	G	P	A	Y	S	Q	S	A	I	S	R	F	E	K	L	.	D	I	T	P	K	S	A	Q	K	L	K	P	V	L	E	K
Template Known Secondary structure												T	T	T													S	S	S														T	.		S
Template Predicted Secondary structure																																												.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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