Job Description Q46864 Confidence 91.07% Date Thu Jan 5 12:35:21 GMT 2012 Rank 87 Aligned Residues 49 % Identity 24% Template c2xsdC_ PDB info PDB header:transcription/dna Chain: C: PDB Molecule:pou domain, class 3, transcription factor 1; PDBTitle: crystal structure of the dimeric oct-6 (pou3f1) pou domain2 bound to palindromic more dna Resolution 2.05 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		P	E	F	I	V	K	V	R	K	K	L	S	L	T	Q	K	E	A	S	E	I	F	G	G	.	.	.	.	.	.	G	V	N	A	F	S	R	Y	E	K	G	N	A	Q	P	H	P	S	T	I	K	L	L	R	V	L
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.												.
Template Conservation																																											.
Template Sequence		A	K	Q	F	K	Q	R	R	I	K	L	G	F	T	Q	A	D	V	G	L	A	L	G	T	L	Y	G	N	V	F	S	Q	T	T	I	C	R	F	E	A	L	.	Q	L	S	F	K	N	M	C	K	L	K	P	L	L
Template Known Secondary structure												T	T															S													T	T	.		S	B
Template Predicted Secondary structure																																											.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions