Job Description Q46864 Confidence 55.77% Date Thu Jan 5 12:35:21 GMT 2012 Rank 298 Aligned Residues 86 % Identity 14% Template c1v9pB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase Resolution 2.90 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.												.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.												.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		Y	C	V	H	C	E	E	S	I	M	N	K	E	E	S	.	.	.	.	.	.	.	.	.	D	A	F	M	A	Q	V	K	A	F	R	.	.	A	S	V	N	A	E	T	V	A	P	E	F	I	V	K	V	R	K	K	L	S	.	.	.	.	.	.	.	.	.	L	T	Q	K	E	A	S	E	I	F	G	G	G
Query Conservation																	.	.	.	.	.	.	.	.	.												.	.																						.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.												.	.																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	C	P	E	C	G	H	R	L	V	K	E	G	K	V	H	R	C	P	N	P	L	C	P	A	K	R	F	E	A	I	R	H	Y	A	S	R	K	A	M	D	I	E	G	L	G	E	K	L	I	E	R	L	L	E	K	G	L	V	R	D	V	A	D	L	Y	H	L	R	K	E	D	L	L	G	L	E	R	M	G
Template Known Secondary structure		B		T	T	T			B		B			T	T	S		B				T	T		G	G	G										S	T	T	T	T			T	T													T	S		S	S	G	G	G	G	T	G	G	G						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		2408	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.	2450	.	.	.	.	.	.	.	.	.	2460	.	.	.	.	.	.	.	.	.	2470	.	.	.	.	.	.	.	.	.	2480	.	.	.	.	.	.	.
		96	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		V	N	A	F	S	R	.	Y	E	K	G	N	A	Q	P	H	P	S	T	I	K	L	L	R	V	L	D
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		E	K	S	A	Q	N	L	L	R	Q	I	E	E	S	K	H	R	G	L	E	R	L	L	Y	A	L	G
Template Known Secondary structure		S	S	S								T	T	T	G	G	G	S										T
Template Predicted Secondary structure
Template SS confidence
		2488	.	2490	.	.	.	.	.	.	.	.	.	2500	.	.	.	.	.	.	.	.	.	2510	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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